PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Araip.U7ZVD | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | MYB_related | ||||||||
Protein Properties | Length: 140aa MW: 15417.8 Da PI: 10.2908 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 44.9 | 2.8e-14 | 35 | 76 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++T+eEd+ +++a++++G++ W+tIar + +t++ +k++ ++ Araip.U7ZVD 35 AFTPEEDDTIIRAHTRFGNK-WATIARLLS-DKTDNAIKNHRNS 76 79******************.*********.**********765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 2.8E-17 | 17 | 82 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 8.8E-6 | 18 | 40 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51294 | 18.342 | 28 | 82 | IPR017930 | Myb domain |
SMART | SM00717 | 2.7E-9 | 32 | 80 | IPR001005 | SANT/Myb domain |
CDD | cd00167 | 6.70E-9 | 35 | 73 | No hit | No description |
Pfam | PF00249 | 6.1E-11 | 35 | 73 | IPR001005 | SANT/Myb domain |
Gene3D | G3DSA:1.10.10.60 | 5.2E-15 | 41 | 79 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 140 aa Download sequence Send to blast |
MQATFRTMVS LPSPIAACCR LRWCNQLSPP VEHRAFTPEE DDTIIRAHTR FGNKWATIAR 60 LLSDKTDNAI KNHRNSTLKR KCASIGPIDD PHFAQPLKRS VSTSAAVPVS TVVVRYSLPT 120 VMATMEVAGR GPTHPCPSPL |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1gv2_A | 7e-22 | 11 | 82 | 34 | 105 | MYB PROTO-ONCOGENE PROTEIN |
1mse_C | 7e-22 | 11 | 82 | 34 | 105 | C-Myb DNA-Binding Domain |
1msf_C | 7e-22 | 11 | 82 | 34 | 105 | C-Myb DNA-Binding Domain |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor that functions in salt stress response. Acts as negative regulator of NHX7/SOS1 and CBL4/SOS3 induction in response to salt stress (PubMed:23809151). In response to auxin, activates the transcription of the auxin-responsive gene IAA19. The IAA19 transcription activation by MYB73 is enhanced by direct interaction between MYB73 and PYL8 (PubMed:24894996). {ECO:0000269|PubMed:23809151, ECO:0000269|PubMed:24894996}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Araip.U7ZVD |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by salt stress. {ECO:0000269|PubMed:23809151}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KF208674 | 1e-110 | KF208674.1 Arachis hypogaea putative MYB-related protein 20 (MYB20) gene, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025661051.1 | 1e-100 | transcription factor MYB44-like | ||||
Swissprot | O23160 | 1e-37 | MYB73_ARATH; Transcription factor MYB73 | ||||
TrEMBL | A0A444YIH9 | 4e-99 | A0A444YIH9_ARAHY; Uncharacterized protein | ||||
STRING | XP_004511885.1 | 3e-45 | (Cicer arietinum) | ||||
STRING | AES94624 | 3e-45 | (Medicago truncatula) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF20824 | 2 | 4 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37260.1 | 6e-38 | myb domain protein 73 |
Publications ? help Back to Top | |||
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