PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.TG77A
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family TALE
Protein Properties Length: 641aa    MW: 71326.5 Da    PI: 6.846
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.TG77AgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.13.5e-092933301954
                  HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
     Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                  Fe   ++yp+ +++  LA+++gLt +qV++WF N R +
  Araip.TG77A 293 FEHflHPYPKDSDKVMLARQTGLTRSQVSNWFINARVR 330
                  664459******************************88 PP
2BELL108.54e-35157228172
         BELL   1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                  +rqel++ k+kL+++l+eV++rY+ y +q+q+v ssFe++ag+g+a+ Yt+lAlk+iS++FrcLkdai+ qi
  Araip.TG77A 157 QRQELHMNKSKLVTMLDEVEQRYREYKQQMQIVTSSFEEAAGYGAARTYTALALKTISKQFRCLKDAISLQI 228
                  699******************************************************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005741.8E-5375226IPR006563POX domain
PfamPF075261.4E-4680225IPR006563POX domain
PROSITE profilePS5007112.05271334IPR001356Homeobox domain
CDDcd000861.85E-11274335No hitNo description
SMARTSM003891.2E-9274338IPR001356Homeobox domain
SuperFamilySSF466893.76E-17275340IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.2E-28277340IPR009057Homeodomain-like
PfamPF059207.4E-18291330IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 641 aa     Download sequence    Send to blast
MATYFHGGNS GTTVTVLPNN RDYSEHTVTT ATTEMGFHRA RGHQSHHHPQ GLSLSLSSQQ  60
LPFRSFANAG GALNSSIQSV VLGSKFLKVA QELLDEAVNV GNDNKVDYSN NKEKMKGNKN  120
VESTSDGGGD DNRSSGGGDG ENSGGDNKQG SELNTAQRQE LHMNKSKLVT MLDEVEQRYR  180
EYKQQMQIVT SSFEEAAGYG AARTYTALAL KTISKQFRCL KDAISLQIKT TGKTLGEDNC  240
MGVKVEGSRL RFIDHNLRQQ RALQQLGMIQ HNAWRPQRGL PERAVSILRA WLFEHFLHPY  300
PKDSDKVMLA RQTGLTRSQV SNWFINARVR LWKPMVEEMY LEEIKDQEHN NNNGSQDDDD  360
DDTNTANKKK KQLIRESSNK ELWSSSSSQL EQPPCSSSVI RLDHLNSNQN TTTPITEISA  420
NSNNNSISTS PLNLRNPHHE IMNSPGTILF FFFFVFPFFF FSRNLSVDME MKPIRETNSN  480
NNNNHLNFGI ELGNPNKDGY PLMASFGNEN HDGGGGSGSG YGSTTFSMED IGRFHQQLVA  540
PRFHGNGVSL TLGLPPSDNN NTNNNFPSQQ VEFLSSHNMH LGGGGGGGGR IHHHHHEIEA  600
ATNDDEFCGM KNNATTPSSH SGTSYDHNNN NIDMWGQFWR V
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4xrs_A1e-16280337158Homeobox protein Meis1
4xrs_B1e-16280337158Homeobox protein Meis1
5bng_A1e-16280338159Homeobox protein Meis2
5bng_B1e-16280338159Homeobox protein Meis2
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.TG77A
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025643161.10.0BEL1-like homeodomain protein 1 isoform X2
TrEMBLA0A445A6770.0A0A445A677_ARAHY; Uncharacterized protein
STRINGXP_007132496.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2925022
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35940.31e-89BEL1-like homeodomain 1