PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.Q1JDY
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB_related
Protein Properties Length: 525aa    MW: 56818.4 Da    PI: 8.2161
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.Q1JDYgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.71.3e-13207252245
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwq 45 
                       +W++eEd ll dav+++G g+W+tIa+  +   +Rt+kq+  rw+
      Araip.Q1JDY 207 TAWSEEEDNLLRDAVQRFGEGHWATIAKGGNfpVKRTAKQIYQRWN 252
                      68**************************9999999**********8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129418.617201259IPR017930Myb domain
Gene3DG3DSA:1.10.10.603.2E-14202257IPR009057Homeodomain-like
SuperFamilySSF466893.3E-12204257IPR009057Homeodomain-like
SMARTSM007177.6E-12205257IPR001005SANT/Myb domain
PfamPF002493.8E-12206253IPR001005SANT/Myb domain
CDDcd116604.69E-13209251No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 525 aa     Download sequence    Send to blast
MTIPEKKPNK LVPFTEQDAA RIAQRYDATT VLTLLQEVAQ AQCPNAKIDW NELVKRTSTG  60
ISNAREYQML WRHLAYGHAL VDNLENGAEP LDDDSDLEYE VEALPPISPE VASETVACVK  120
VKVMIASLSE STPSSSTIEA PLTIHAPVCN SSKTSNKGSQ SSSLMQGTEI IFPVTIKRQT  180
LPAVSLTDNI ESKGLDGSNM ASKKRKTAWS EEEDNLLRDA VQRFGEGHWA TIAKGGNFPV  240
KRTAKQIYQR WNFLQKKDDS TNSGPILTST RYDTAEQQAT RHSLSLALDM PLKKLTAPGM  300
TSRKTLNMSG KNLLQHVATE SSPLHGHVVP PQHPSQGSFV GSCSSSLKST LVPEKPLLEV  360
HPTLNGTVKG ATIVSGAQIV STSDSGSQVK VSHRNVVATT SSCLAKSSTP ASLPPESKVQ  420
FQTDPSSAPV CTQSTVVLAC PASCIKPAKA SSLTMEKSPE QEKHDNSVVY KAPTKQEVRV  480
SNLSPLKEDK TIVMEITSKE VIEDKMIIKN QVGINQGTAK DTNLK
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.Q1JDY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016163719.10.0uncharacterized protein LOC107606216 isoform X2
RefseqXP_025668174.10.0uncharacterized protein LOC112766490 isoform X2
TrEMBLA0A445C9400.0A0A445C940_ARAHY; Uncharacterized protein
STRINGGLYMA06G10170.11e-151(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF31223256
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09710.22e-52MYB_related family protein