PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.LL89K
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family ERF
Protein Properties Length: 353aa    MW: 39006.9 Da    PI: 5.565
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.LL89KgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.36e-1673130155
          AP2   1 sgykGVrwdkkrgrWvAeIrdpseng.kr...krfslgkfgtaeeAakaaiaarkkleg 55 
                  ++++GVr++   g+WvAeIr p++ + +     r +lg+f ta eAa a+++a++ ++g
  Araip.LL89K  73 CKFRGVRQRI-GGKWVAEIRKPVNSKrVGeeaNRLWLGTFSTALEAALAYDEAARTMYG 130
                  79*****999.9*********98866644579***********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000185.36E-2673140No hitNo description
PfamPF008472.7E-1173130IPR001471AP2/ERF domain
SMARTSM003801.4E-2874144IPR001471AP2/ERF domain
SuperFamilySSF541713.2E-1674139IPR016177DNA-binding domain
PROSITE profilePS5103220.40274138IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.3E-2674139IPR001471AP2/ERF domain
PRINTSPR003677.5E-77586IPR001471AP2/ERF domain
PRINTSPR003677.5E-7104120IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    Send to blast
MKTETIPRKR RSRRRRSGGS DSVESTLEKW KEYNKQQQPM SEGDGVEVIH KVPAKGSKKG  60
CMKGKGGPQN YDCKFRGVRQ RIGGKWVAEI RKPVNSKRVG EEANRLWLGT FSTALEAALA  120
YDEAARTMYG PGARLNFPQH HGIELIGSNG SSTGPLFDQK SPSGTYIDTL NGGDVAKVDG  180
LEGNLDMGLE EQLKFSEVNE LLEMECEGGI LQGPFKYVKD EVAGGSEGLE GELEEVLKNS  240
GLVEECNNYM LEDSMCMAMN TGADYNSCDA TKQGIMGKSE VENYKSCNEL NCTNHCFGYL  300
HNMIPNSNPM IPNGNPKYEQ FSNLKSKAAI PTKDMEEVLA EIRQFCKQVL QGE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-13741431477Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.LL89K
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016198706.10.0uncharacterized protein LOC107639670
RefseqXP_025648833.10.0uncharacterized protein LOC112743727
TrEMBLA0A444ZK720.0A0A444ZK72_ARAHY; Uncharacterized protein
STRINGXP_007140202.11e-113(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF132862127
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11020.14e-24DRE/CRT-binding protein 2B