PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.L3N7F
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family C2H2
Protein Properties Length: 270aa    MW: 30994.5 Da    PI: 8.7238
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.L3N7FgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.20.00027104127123
                  EEETTTTEEESSHHHHHHHHHH.T CS
      zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                  +kC++C+ksF++   L +H  + H
  Araip.L3N7F 104 WKCGYCKKSFRDEKFLDQHFDNrH 127
                  58**************99976655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501579.058104132IPR007087Zinc finger, C2H2
PROSITE patternPS000280106127IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    Send to blast
MNKAIDFASV FLLFTLFSHQ FILRVSSSNS PILPNQGYAD ERILKPEQEH VHEVHCSRER  60
SRAARKVIEE QENYQLSSKC RLHPENDMFR DQEEHKICLG FHDWKCGYCK KSFRDEKFLD  120
QHFDNRHSNH LNLSDGKCLA DLCGALHCDA VMNTKFSRSK CNPAAATRNK HLCESLAESC  180
FPVSDGPSAS RLHEIFLHQF CEAHTCSGKQ KPFSRGGKVQ KSIFVVVSGA LILVLLPLFY  240
LFLYLVQRDM KSSTQELRRI SKMGRKSKPS
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.L3N7F
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016187605.10.0uncharacterized protein LOC107629345
RefseqXP_020973371.10.0uncharacterized protein LOC107629345
RefseqXP_025641544.10.0uncharacterized protein LOC112736352
TrEMBLA0A445AAG20.0A0A445AAG2_ARAHY; Uncharacterized protein
STRINGXP_004515836.11e-136(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32161319
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63280.12e-92C2H2-like zinc finger protein