PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.K2DDF
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 335aa    MW: 37580.5 Da    PI: 5.5888
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.K2DDFgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.62.6e-144597255
                 HHHHHHHHHHHHHHHHHH...HHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  2 rrahnerErrRRdriNsa...feeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                 r +h+e E+rRR++iN++   f+ Lr+l+P++    ++K +Ka+ L +++eYI+ Lq
  Araip.K2DDF 45 RSKHSETEQRRRSKINERqalFQVLRDLIPQN----DQKRDKASFLLEVIEYIQFLQ 97
                 899*************976669*********9....9*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.4214396IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.1E-2143117IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.57E-1644124IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.27E-1545101No hitNo description
PfamPF000109.5E-124597IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.2E-849102IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    Send to blast
MARSAKGHQE ELDDDDEEHF TADTSSPHKV KLDESNSGKR VNPHRSKHSE TEQRRRSKIN  60
ERQALFQVLR DLIPQNDQKR DKASFLLEVI EYIQFLQEKL QIYEQTCEGW NQEPTKLIPW  120
RGHHGPAENK ADTSQAMQNG SAHEKNDVSP LLPKNVQNPI ESDLSTTTIQ KGHTIGSAVE  180
AVPMGMQMRL DAFDPVVSSS MPNQRLHQPI SNADMSFQIQ PQVLFSKPSS GNYMVSDNVL  240
MEHEELTNES ESQSISNAYS QGVLDTLTQA LQSSGVDLSQ TSVSVQIDVG RRSNPGFIPS  300
ASSSKVYGNQ FVTNRVNYCS EDSDQSLKRL RRDAT
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.K2DDF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016194448.10.0transcription factor BIM3 isoform X1
RefseqXP_025650119.10.0transcription factor BIM3 isoform X1
TrEMBLA0A0B2SLD81e-156A0A0B2SLD8_GLYSO; Transcription factor BIM2
STRINGGLYMA08G28010.11e-156(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF17303382
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G38860.18e-56BES1-interacting Myc-like protein 3