PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.GZ79T
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family C2H2
Protein Properties Length: 278aa    MW: 30955.4 Da    PI: 6.3934
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.GZ79TgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.90.000333659123
                 EEETTTTEEESSHHHHHHHHHH.T CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrHirt.H 23
                 ++C+ Cg+ F  + +L++H++t H
  Araip.GZ79T 36 FPCTACGEIFQKPLLLEQHQSTkH 59
                 89*******************999 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501579.3693664IPR007087Zinc finger, C2H2
PROSITE patternPS0002803859IPR007087Zinc finger, C2H2
SuperFamilySSF563993.55E-1361277No hitNo description
Gene3DG3DSA:3.90.228.101.2E-562181IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene3DG3DSA:3.90.228.101.2E-4211277IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    Send to blast
MNIPRRNLPG SLVRPESEIS GELDSGLFFP LRNDIFPCTA CGEIFQKPLL LEQHQSTKHA  60
VSELPGSDPG HNIVQIIFKS GWPEIRKFPT ITRILKIHNS QKILSRFEEY REAVKERAAL  120
HGGIMSTRRR DERCLADGNE LMRFHCSTFL CDLGLNGNSS ICSQQFCNIC GIIKSGFSPK  180
LDGISTLASS WRAHVSIPED IESEFGFMNV KRAMLVCRVI AGRIGSDSDE AEKEDGGSFD  240
SVMARGGDSG VYTRLDEEEL LVFNPRAVLP CFVIVYSV
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.GZ79T
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016165436.10.0uncharacterized protein LOC107608029
RefseqXP_025626599.10.0uncharacterized protein LOC112720021
TrEMBLA0A445AMY10.0A0A445AMY1_ARAHY; Uncharacterized protein
STRINGGLYMA18G07330.11e-161(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF106682936
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29660.11e-103C2H2 family protein