PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.DF8F7
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family C2H2
Protein Properties Length: 294aa    MW: 32281 Da    PI: 9.17
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.DF8F7genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.50.00022200222223
                  EETTTTEEESSHHHHHHHHHH.T CS
      zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                  +Cp Cg  Fs+  +L+ H ++ H
  Araip.DF8F7 200 QCPQCGAKFSSVTTLVDHVQKvH 222
                  7******************9988 PP
2zf-C2H213.10.00028239260323
                  ETTTTEEESSHHHHHHHHHH.T CS
      zf-C2H2   3 CpdCgksFsrksnLkrHirt.H 23 
                  Cp+C++ F ++  L+ H  + H
  Araip.DF8F7 239 CPKCSRGFVDPVALVEHVERdH 260
                  *****************99888 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.1110.105.6E-1065126IPR000058Zinc finger, AN1-type
SuperFamilySSF1183109.61E-868118No hitNo description
PfamPF014282.2E-776116IPR000058Zinc finger, AN1-type
SMARTSM003550.0064199222IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.951199229IPR007087Zinc finger, C2H2
PfamPF138942.4E-4200222No hitNo description
PROSITE patternPS000280201222IPR007087Zinc finger, C2H2
SMARTSM0035512237260IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280239260IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    Send to blast
MLGTYRSPLV PWVCLVLWRR SALSPNKHDV TVVICPLCAK GVRLIPDQDP NITWENHVNT  60
ECDPSNYEKA TKKKKCPAPG CREVLVFSNT IKCRDCMIDH CLKHRFGPAH KCPGPKKLET  120
SFSFMSLVNR NRKEEPKPNL TSASSSKWTT GLFNVASSIM ASAEAGISKL SGETNQSQQT  180
TRNGTGQSSG SGNRNGLVEQ CPQCGAKFSS VTTLVDHVQK VHERSGNRPG AKKVTIDACP  240
KCSRGFVDPV ALVEHVERDH GGKFGMGVEM GAKYFMDTNR SVECFIVLPA MQNK
Functional Description ? help Back to Top
Source Description
UniProtMay be involved in environmental stress response. {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00306DAPTransfer from AT2G41835Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.DF8F7
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016204987.11e-176zinc finger AN1 and C2H2 domain-containing stress-associated protein 11
RefseqXP_025660786.11e-176zinc finger AN1 and C2H2 domain-containing stress-associated protein 11
SwissprotQ8VZ422e-87SAP11_ARATH; Zinc finger AN1 and C2H2 domain-containing stress-associated protein 11
TrEMBLA0A444YHL51e-174A0A444YHL5_ARAHY; Uncharacterized protein
STRINGGLYMA03G29400.11e-135(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF58643351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41835.16e-90C2H2 family protein