PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araip.CVG02

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 160aa MW: 18980.1 Da PI: 10.6075

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.CVG02	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	56.1	1.2e-17	49	138	1	89
FAR1 1 kfYneYAkevGFsvrkskskks...krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +fY++Y+k+vGF +r+++++ k+ + +++ Cs+eg+re++ k+ + r + t gCk ++ v +++ +++w vtklel+H+H++ Araip.CVG02 49 EFYSNYSKKVGFVTRIRNTNFDktrKELKVPINQSIHCSREGYRESRVKA---AMRVKRITTAGCKERMYVMLDRhNDNWLVTKLELKHTHAC 138 6************999887733345556689**********999...888899999*******999*************87 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	3.7E-15	49	139	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 160 aa Download sequence Send to blast
MSSFIDFRGK NLKTLFRKRM MLRSRITGIP VEEIPYVGLR FDSLQRAQEF YSNYSKKVGF 60 VTRIRNTNFD KTRKELKVPI NQSIHCSREG YRESRVKAAM RVKRITTAGC KERMYVMLDR 120 HNDNWLVTKL ELKHTHACSA EQAVHYSEYR EPTMHVKCVI

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.CVG02

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020967767.1	4e-89	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A445BJM2	3e-88	A0A445BJM2_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF14126	2	17

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59470.2	9e-14	FAR1 family protein