PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.77WYN
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family G2-like
Protein Properties Length: 353aa    MW: 39842.8 Da    PI: 7.3294
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.77WYNgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like1023.7e-32202257156
      G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                  k+r++W+peLH+rFv+a++qLGG+++AtPk+i+elm+v+ Lt+++vkSHLQkYRl+
  Araip.77WYN 202 KQRRCWSPELHRRFVNALQQLGGAQVATPKQIRELMQVENLTNDEVKSHLQKYRLH 257
                  79****************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.614199259IPR017930Myb domain
Gene3DG3DSA:1.10.10.603.7E-29200260IPR009057Homeodomain-like
SuperFamilySSF466891.66E-18200260IPR009057Homeodomain-like
TIGRFAMsTIGR015574.4E-27202257IPR006447Myb domain, plants
PfamPF002499.0E-8204255IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010092Biological Processspecification of organ identity
GO:0010629Biological Processnegative regulation of gene expression
GO:0048449Biological Processfloral organ formation
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    Send to blast
MELSLDLSLS FVPKTISMFL GDVSRSTQIS DKLAMLDDFL NRLEDEMTKI HAFKRELPLC  60
MLLVTDAITR LKEEKLRCMG MQDPQPLTTQ EPHHNNNNWM TSLQLWSTQT KSVTFFFFFS  120
LEDCSVPENP IKRRENKNRS GGGGGVALLN GNSKEVSKVP SFSLMTTTPA PELKSSSSKS  180
NSSSLFMNRV EIQAQQSQNP RKQRRCWSPE LHRRFVNALQ QLGGAQVATP KQIRELMQVE  240
NLTNDEVKSH LQKYRLHVRK FPVSSSAEHD ANNNNIDDDD EDDLWEMKKK DQCGKGNKNS  300
SSQSQSGSPQ GPLLLAGSVK GLSSMDADDE HSDCRNWKAA IHHQPPESDN HSR
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00629PBMTransfer from PK14402.1Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.77WYN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016201759.10.0transcription factor HHO5 isoform X1
RefseqXP_025652773.10.0transcription factor HHO5 isoform X1
TrEMBLA0A444ZA520.0A0A444ZA52_ARAHY; Uncharacterized protein
STRINGGLYMA01G39040.11e-109(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF120834107
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37180.13e-52G2-like family protein