PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.4J9YV
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family G2-like
Protein Properties Length: 282aa    MW: 31954.1 Da    PI: 9.2011
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.4J9YVgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like94.21e-294198155
      G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPkti...lelmkvkgLtlehvkSHLQkYRl 55
                 k+rlrWt+eLH+rFv+av++LGG+++AtPk i   +++m+v +L+++hvkSHLQkYR+
  Araip.4J9YV 41 KERLRWTHELHDRFVHAVNRLGGPDRATPKGIlkgMKAMGVSDLSIYHVKSHLQKYRI 98
                 68******************************33345788999**************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.31938101IPR017930Myb domain
Gene3DG3DSA:1.10.10.602.9E-273999IPR009057Homeodomain-like
SuperFamilySSF466893.23E-154098IPR009057Homeodomain-like
TIGRFAMsTIGR015572.2E-224199IPR006447Myb domain, plants
PfamPF002497.1E-84397IPR001005SANT/Myb domain
PfamPF143795.4E-10130169IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    Send to blast
MNVPWKTSPT LSEHGLGPQT PKEKKRAVMG STRSDASANG KERLRWTHEL HDRFVHAVNR  60
LGGPDRATPK GILKGMKAMG VSDLSIYHVK SHLQKYRISK LIPESTSKGK LEKRSISNTL  120
PNFSSTCALQ LKEILQIQRE VRNRLSDQAE VQRRLKQKIE AQDKYLDRIG QSHESRTTIT  180
RKSSKPSSFC ATNNNNKHLP SLSEESESII ETHPEVVVEE EEEHQSCSKR QRVVIDEHVF  240
PSSFELELES STTTEFIDQS WNLSWSQLAA ACESPLMPGF LL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A1e-1941100157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B1e-1941100157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C1e-1941100157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D1e-1941100157Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.4J9YV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016198579.10.0myb family transcription factor PHL7-like isoform X1
TrEMBLA0A444ZPF60.0A0A444ZPF6_ARAHY; Uncharacterized protein
STRINGXP_004514212.11e-105(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF106592535
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.11e-46G2-like family protein