PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.3Z2Y1
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family C2H2
Protein Properties Length: 687aa    MW: 77046.6 Da    PI: 6.9815
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.3Z2Y1genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.90.0006789110223
                  EETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2   2 kCpdCgksFsrksnLkrHirtH 23 
                  kC +C++ F +  n++rHir H
  Araip.3Z2Y1  89 KCDKCSREFCSTINYRRHIRAH 110
                  7*******************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501579.95188115IPR007087Zinc finger, C2H2
PROSITE patternPS00028090111IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 687 aa     Download sequence    Send to blast
MAVSAKEKAK AKAKGYDGSM EVVKTEDRID TIIRQAIGRE PFFTFPRATD TPVQWIQLLH  60
ALDQQGVSNS FPELPGWPLL YPVKVQLQKC DKCSREFCST INYRRHIRAH HRLKKLDKDS  120
TKNRDLLGAY WDKLSIEEAK EVVSFENVML EEVPASSILE ALTALLQKPG FSSLPQYYLR  180
AGAALLDIVH SQSSCFPLSS QELFTILDDA SEKTCLCGTA VSMQRYIFDG EAGKIGLEPR  240
NLVACTCFLL EQKLVKAWLA DKDAEALRCH RQLVEEEEAA QKRQAEILER RRQKKLRQKD  300
QKAREQRHEA EIEEHIGSAE DDLSAAEASL ATYDSEAHNL ETFIDSAPSY DPFQCPDTNV  360
GLDGVQSSYN LGSDQYIERR SARRPNRRLT AVSRQKGPQK SQWAVANDSH TSQNSTLSKI  420
EVIQKYGTHR DHRVATVANG CRVWSPKSKP EIDRMVPEAR VDKEPDQDKD HEVLIGSISI  480
TLGNCSQSER NAVASRADCN VDNLANQNSS QNKPLNPDFF QNSNNMATKL WRPVSRHETK  540
NPLPVQSGET EVSTIHENGD CQNQSDPSCL RSCSTDGSDV GFEINVSNTE GIMDPGSLQL  600
LSSHAAKVFL EQRWKEAMSS NHLQLIVSDY EPPGCQEIQD SRMAVCQSSE VRVKRLAAAP  660
KVPQSNHRMK PEKGTKIKYI PKQKTAA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1288295ERRRQKKL
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.3Z2Y1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016204288.10.0uncharacterized protein LOC107644858
RefseqXP_020958901.10.0uncharacterized protein LOC107644858
RefseqXP_025656877.10.0uncharacterized protein LOC112751818
RefseqXP_025656878.10.0uncharacterized protein LOC112751818
TrEMBLA0A444YXH40.0A0A444YXH4_ARAHY; Uncharacterized protein
STRINGGLYMA16G30100.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF45172739
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25610.11e-131C2H2-like zinc finger protein