PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.3JJ8N
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family ERF
Protein Properties Length: 492aa    MW: 55222.8 Da    PI: 4.5643
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.3JJ8NgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.29.6e-1974130255
          AP2   2 gykGVrwdkkrgrWvAeIrdpseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                  +y+GVr++  +g+WvAeIr+p +n    k+ kr +lg+f ta+eAa a+++a+k ++g
  Araip.3JJ8N  74 RYRGVRQRI-WGKWVAEIREPISNHeskKNaKRLWLGTFTTAFEAALAYDKAAKTMYG 130
                  59****998.**********65544576669***********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008476.0E-1374130IPR001471AP2/ERF domain
SMARTSM003808.2E-3474144IPR001471AP2/ERF domain
PROSITE profilePS5103221.87874138IPR001471AP2/ERF domain
SuperFamilySSF541717.85E-1874138IPR016177DNA-binding domain
CDDcd000181.46E-2774140No hitNo description
PRINTSPR003677.2E-97586IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.7E-2775139IPR001471AP2/ERF domain
PRINTSPR003677.2E-9104120IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 492 aa     Download sequence    Send to blast
MATEIVSGNR NSSKRRRCGS DSLEDTLEKW KKKNIDIQHD FSTNGVHVVH KVPAKGSKKG  60
CMKGKGGPQN SEFRYRGVRQ RIWGKWVAEI REPISNHESK KNAKRLWLGT FTTAFEAALA  120
YDKAAKTMYG SGARLNFPEH DLESVGSEES PSKNGIILSS GEAPKAEDLD GNFHQFREDK  180
PNFSYVEAFE GTKEEDHDVQ KNEKCDDASV VHKEMKDIEA KIPGESEGIE GESEEVLKCP  240
GSGVEFIGMA MNSGADGAAS DANEHEIVAN NIEVPIEELT KSLTSSCDLS NIDNHSDDYF  300
NNQISDEDCN PKPNYDQSNI KNEAYMVKKK HVEEVISEIL RLYSNKCSNN CIQSQNENDE  360
NQPSVNVEEE KPLMPVEADM VHTCNCYGCD NSDDEIKNEP NGSDDNVGEM YEFQALNSNI  420
DRKLELQEKG DDGNVLSEFS SKRNRKLCEH LNNMQVASIE MDHDYSFLRP DYDFGLLEEQ  480
KLLDLCFSHL GS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A4e-1975138360ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.3JJ8N
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016184013.10.0uncharacterized protein LOC107625804
RefseqXP_025633836.10.0uncharacterized protein LOC112728069
TrEMBLA0A445AKV40.0A0A445AKV4_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF132862127
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11020.14e-31DRE/CRT-binding protein 2B