PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.31N0W
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family C2H2
Protein Properties Length: 325aa    MW: 37365.5 Da    PI: 10.3474
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.31N0WgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2157.1e-05120143123
                  EEETTTTEEESSHHHHHHHHHH.T CS
      zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                  ++C  Cg+ F +++ L++H +  H
  Araip.31N0W 120 HVCRVCGRKFYTNEKLVNHFKQlH 143
                  79*****************98766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5015711.302120148IPR007087Zinc finger, C2H2
PROSITE patternPS000280122143IPR007087Zinc finger, C2H2
CDDcd061670.00181223254No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    Send to blast
MGSILKFRNI YGSFKCFHSK PNWGSGASDK TPKLEPNRNN NRVGIFWDLD NKPPNSIPPF  60
EVANKLRIVA SSFGVVRHMV AYANSHTFTS VPHAVRQWRK EKELYNRLES KGVIKRNESH  120
VCRVCGRKFY TNEKLVNHFK QLHESEQMKR VNQIASARGN RRVKLVAKYS MKMKKYKKAA  180
RDILTPRVGY GLADELKRAG FWVQSVLDKP QLRIMHWKVT WWVECIVVVS DDYDFANVIR  240
EAKLRCLKTV VIGDTIDGVH TVAKMFTLMI PVLVNFCVSK YRMVLFSGIA AEALVYGEAE  300
GAENDENLFR NICLLLEPRL SLTEP
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.31N0W
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025632078.10.0uncharacterized protein LOC112726774 isoform X1
RefseqXP_025632079.10.0uncharacterized protein LOC112726774 isoform X1
RefseqXP_025632080.10.0uncharacterized protein LOC112726774 isoform X1
TrEMBLA0A445ADT11e-161A0A445ADT1_ARAHY; Uncharacterized protein
STRINGAES719771e-118(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF75002533
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G12240.14e-83C2H2 family protein