PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.1B6QA
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family Trihelix
Protein Properties Length: 440aa    MW: 50225.9 Da    PI: 6.3551
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.1B6QAgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix69.56.5e-22117213185
     trihelix   1 rWtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrt.sessstcpyfdql 85 
                  +Wt++ v++Li++++ ++++   +            +kk++W+ vsk m ++g+++sp+qC++k+++lnkryk+++++ +++t ++++++  + d++
  Araip.1B6QA 117 KWTDNVVQLLIAVVSCVGDDGTINGtdghkrksgvlQKKGKWKTVSKIMISKGCHVSPQQCEDKFNDLNKRYKRLNDILGRGTcCQVVENPTLMDSM 213
                  7**************777766643223445566777**********************************************857888888777776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138376.5E-18115240No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 440 aa     Download sequence    Send to blast
MNSSGLGGSF LGGPAGGILD LELPFHRHQQ QSQMGHPSVT GQHHLNMRTD LENDHPIGLM  60
ELKGSNAGVN FGKGKGIASS NPANSNDLSD DDDAEDGNCE NFDGGKSKKG SPWQRMKWTD  120
NVVQLLIAVV SCVGDDGTIN GTDGHKRKSG VLQKKGKWKT VSKIMISKGC HVSPQQCEDK  180
FNDLNKRYKR LNDILGRGTC CQVVENPTLM DSMPNLSAKA KDDVRKILSS KHLFYKEMCA  240
YHNGQRIPNF HDLDLQGYSL DHGRDSRDNN GSEDEAEDNN ESDDDDLDNA HGDGERADEF  300
CDRRKSSEED FHFWPQSIEM DKFEVEMARV FQDPTKSVRE RREWIKIKML QLQEQRVSYQ  360
VQALELEKQR FKWLRYCSKK DRELERLRLE NERMKLENER RVLKLKQKEQ ETDLSRPEMS  420
LDPASLGINR PQGREHFNFS
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.1B6QA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016171346.10.0uncharacterized protein LOC107613731
RefseqXP_016171347.10.0uncharacterized protein LOC107613731
RefseqXP_025673698.10.0uncharacterized protein LOC112772901
RefseqXP_025673699.10.0uncharacterized protein LOC112772901
TrEMBLA0A444Y8C20.0A0A444Y8C2_ARAHY; Uncharacterized protein
STRINGXP_004486956.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF105463240
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21200.15e-65sequence-specific DNA binding transcription factors