PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Araip.18666 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | WRKY | ||||||||
Protein Properties | Length: 124aa MW: 14133.5 Da PI: 8.3419 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 26.3 | 1.5e-08 | 61 | 86 | 34 | 60 |
-EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 34 vkkkversaedpkvveitYegeHnhek 60 ++k vers+ d++++ei+Y+g+Hnh+k Araip.18666 61 SRKMVERSH-DGQITEIIYKGTHNHSK 86 69*******.***************85 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03106 | 5.8E-5 | 61 | 84 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 5.3E-5 | 61 | 87 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 124 aa Download sequence Send to blast |
MARNTAVTFR FLCMCEMYIN RDPFRFPISI CLLCITMHHY IPDISPIALL DSPIMPPILR 60 SRKMVERSHD GQITEIIYKG THNHSKPHLG RRASGLSTDE MSDMGEALKL VEKNVQPGAK 120 DTYT |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Araip.18666 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015962000.1 | 2e-25 | WRKY transcription factor SUSIBA2-like | ||||
Refseq | XP_025696359.1 | 2e-25 | probable WRKY transcription factor 20 | ||||
TrEMBL | A0A445DCL7 | 2e-25 | A0A445DCL7_ARAHY; Uncharacterized protein | ||||
STRING | GLYMA18G47741.1 | 2e-17 | (Glycine max) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G26640.2 | 2e-12 | WRKY family protein |