PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Araip.0D160 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | G2-like | ||||||||
Protein Properties | Length: 217aa MW: 23704.1 Da PI: 11.4611 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 85.3 | 6.4e-27 | 2 | 52 | 2 | 52 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQk 52 prlrWtp+LH +F +av++LGG+e+AtPk +l+lm+v gL+++hvkSHLQ Araip.0D160 2 PRLRWTPNLHLSFSHAVQRLGGQERATPKLVLQLMNVRGLSIAHVKSHLQI 52 8*************************************************5 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 2.9E-23 | 1 | 51 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51294 | 9.3 | 1 | 58 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 4.66E-11 | 2 | 52 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 6.3E-19 | 2 | 52 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 4.3E-6 | 3 | 51 | IPR001005 | SANT/Myb domain |
Gene3D | G3DSA:1.25.10.10 | 1.6E-4 | 86 | 147 | IPR011989 | Armadillo-like helical |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence Send to blast |
MPRLRWTPNL HLSFSHAVQR LGGQERATPK LVLQLMNVRG LSIAHVKSHL QILKGSLLML 60 SLHCSRLLIL SMRRIHEGAS AAPKGSVNTS ESSSLVAAGG LDSLPREDIS GKITPTLLKS 120 LESPELKVRM ESIEAVNKIL EEANKRIQAN GTGIPTYKAA LTLLMVFGVG PTVFGIMSNI 180 HKLVRKKNGS MLRAFIALAL IKFKQPWLWS SSSKSKG |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 5e-16 | 3 | 51 | 4 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 5e-16 | 3 | 51 | 4 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_A | 4e-16 | 3 | 51 | 3 | 51 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 4e-16 | 3 | 51 | 3 | 51 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 4e-16 | 3 | 51 | 3 | 51 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 4e-16 | 3 | 51 | 3 | 51 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 5e-16 | 3 | 51 | 4 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 5e-16 | 3 | 51 | 4 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 5e-16 | 3 | 51 | 4 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 5e-16 | 3 | 51 | 4 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 5e-16 | 3 | 51 | 4 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 5e-16 | 3 | 51 | 4 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Araip.0D160 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A445AT44 | 1e-139 | A0A445AT44_ARAHY; Uncharacterized protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42660.1 | 3e-25 | G2-like family protein |