PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Neem_4377_a_2
Organism
Azadirachta indica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Meliaceae; Azadirachta
Family NAC
Protein Properties Length: 175aa    MW: 19861.3 Da    PI: 4.7146
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Neem_4377_a_2genomeNGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM28.15.7e-096211474124
            NAM  74 knratksgyWkatgkdkevlskkgelvglkktLvfykg..rapkgektdWvmh 124
                     nr+++ g+W++tg++ +v + +g+ +  k++L +y +   ++k+++t+W+m+
  Neem_4377_a_2  62 FNRQVAGGFWRKTGSESDVNNDNGTPTAKKTVLRYYMKdpITNKAVETRWLMN 114
                    689999***************9**************6523578889******7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100510.451140IPR003441NAC domain
SuperFamilySSF1019414.58E-1610130IPR003441NAC domain
PfamPF023651.2E-612114IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    Send to blast
MASPTAPETF VAGVVFDPDE REPVFHCLIG KVSGNTGETG FSYIREIDLY QYQPSQIPRR  60
NFNRQVAGGF WRKTGSESDV NNDNGTPTAK KTVLRYYMKD PITNKAVETR WLMNLHMLIE  120
SQPPNPNNEE SEMASYIIHI PPNPNKEESE MASYIIHISN CFYEVDSMDS LCCLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15500.16e-09NAC domain containing protein 3