PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Neem_2748_f_1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Meliaceae; Azadirachta
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Family | bZIP | ||||||||
Protein Properties | Length: 358aa MW: 40563.5 Da PI: 6.9592 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 47.7 | 3.3e-15 | 275 | 327 | 5 | 57 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 +r+rr++kNRe+A rsR+RK+a++ eLe + +L++eN++Lk+++ el+++ a Neem_2748_f_1 275 RRQRRMIKNRESAARSRARKQAYTVELELELTQLKEENEQLKQTVMELEQKRA 327 69***********************************************9887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.4E-11 | 271 | 335 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.634 | 273 | 325 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.19E-11 | 275 | 325 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.9E-14 | 275 | 328 | No hit | No description |
CDD | cd14707 | 2.64E-22 | 275 | 316 | No hit | No description |
Pfam | PF00170 | 3.7E-13 | 275 | 327 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 278 | 293 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009409 | Biological Process | response to cold | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0009651 | Biological Process | response to salt stress | ||||
GO:0009737 | Biological Process | response to abscisic acid | ||||
GO:0010152 | Biological Process | pollen maturation | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0033613 | Molecular Function | activating transcription factor binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 358 aa Download sequence Send to blast |
MALSDSVSVG YGGGEPESPH QTPKSPKDQA SSPLDRQNSI FSLTLDEIQL KSGRNFGSMN 60 MDEFLTNLWN VDENQVSSQS PPNQSELQPI NDNNVIQTDP PTLTRQNSFS IPIQICKKTL 120 DEVWSEIQKN VSMDNIISNH KPLERQQTFG EITLEEFLIK AGVVQEPTTT PKSLSQQQKV 180 DRQPIQINNI NNNTCLDASF DMEPNSMIAL AFSTHQNVGN DLLVNKAYGA YPIYTLTNTN 240 IVENDKSTHG VLETSGVKNN RKRIIDGPLE MVVERRQRRM IKNRESAARS RARKQAYTVE 300 LELELTQLKE ENEQLKQTVM ELEQKRAQEI FKRNKQSKMA RKKGENLKTL SRTTSSGW |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024957592.1 | 1e-124 | ABSCISIC ACID-INSENSITIVE 5-like protein 1 isoform X1 | ||||
Refseq | XP_024957593.1 | 1e-124 | ABSCISIC ACID-INSENSITIVE 5-like protein 1 isoform X1 | ||||
Refseq | XP_024957594.1 | 1e-124 | ABSCISIC ACID-INSENSITIVE 5-like protein 1 isoform X1 | ||||
Refseq | XP_024957595.1 | 1e-124 | ABSCISIC ACID-INSENSITIVE 5-like protein 1 isoform X1 | ||||
Refseq | XP_024957596.1 | 1e-124 | ABSCISIC ACID-INSENSITIVE 5-like protein 1 isoform X1 | ||||
TrEMBL | A0A1R3FUS1 | 1e-116 | A0A1R3FUS1_COCAP; Uncharacterized protein | ||||
STRING | EOY33458 | 1e-116 | (Theobroma cacao) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM11652 | 22 | 30 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G44460.1 | 6e-59 | bZIP family protein |