PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy022899

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

TALE

Protein Properties

Length: 573aa MW: 62611 Da PI: 7.8135

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S59540102	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.9	1.9e-09	258	295	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gLt +qV++WF N R + Ahy022899 258 FEHflHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVR 295 664459******************************88 PP
2	BELL	123.8	6.9e-40	122	193	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +rqelq+kk+kL+s+l+eV++rY+qy++q+q+vissFe++ag g+ak+YtslAlk+iS++FrcLkdai++qi Ahy022899 122 QRQELQMKKSKLVSMLDEVEQRYRQYHHQMQVVISSFEQAAGFGAAKSYTSLALKTISKQFRCLKDAISSQI 193 69*********************************************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00574	3.6E-65	45	191	IPR006563	POX domain
Pfam	PF07526	2.4E-50	50	190	IPR006563	POX domain
PROSITE profile	PS50071	12.017	236	299	IPR001356	Homeobox domain
SMART	SM00389	9.3E-10	239	303	IPR001356	Homeobox domain
CDD	cd00086	1.15E-12	239	300	No hit	No description
SuperFamily	SSF46689	2.69E-17	240	306	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	6.7E-29	242	306	IPR009057	Homeodomain-like
Pfam	PF05920	3.7E-18	256	295	IPR008422	Homeobox KN domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 573 aa Download sequence Send to blast
XLPPQQQQQQ QQQQTGTYRS LSGEVEVAVA GGVGNSPSSA SNGISGVQGV LLGSKYLKAA 60 QELLDEVVNV GNKGISKEEL AEKVKPNRES NSGVGEGSSG GGVCGGENSD AGKHVAELTT 120 AQRQELQMKK SKLVSMLDEV EQRYRQYHHQ MQVVISSFEQ AAGFGAAKSY TSLALKTISK 180 QFRCLKDAIS SQIRATSKTL GEDDCLGAKV EGSRLRYVDH HLRQQRALQQ LGMIQPNAWR 240 PQRGLPERAV SILRAWLFEH FLHPYPKDSD KVMLAKQTGL TRSQVSNWFI NARVRLWKPM 300 VEEMYMEEVK EQENNNNNNG SERSKESSKE LGSASNATTN NGAPDNNNNN NPVLDPIKVL 360 HQSKQECFNN NSSPTGAGEI SVNSSLSTSP MGGGVGSLQS HSGFHLAGSS DMQIRSPNKA 420 RNASEIMHNS PSSILSVDME MKHINGDHHR EPNSITGYGA FSMEDIGTRF SNXPVTDHHH 480 HQLASSRFQG NNGVSLTLGL PHNDNTVPIS ATQHGFLPQN MHSLGRRLEI GNNGNEFCVI 540 NNPSSSHPGP TYESIDIQNR KRFAAQLLHD FVA

Sequence ? help Back to Top

Protein Sequence Length: 573 aa Download sequence Send to blast

XLPPQQQQQQ QQQQTGTYRS LSGEVEVAVA GGVGNSPSSA SNGISGVQGV LLGSKYLKAA  60
QELLDEVVNV GNKGISKEEL AEKVKPNRES NSGVGEGSSG GGVCGGENSD AGKHVAELTT  120
AQRQELQMKK SKLVSMLDEV EQRYRQYHHQ MQVVISSFEQ AAGFGAAKSY TSLALKTISK  180
QFRCLKDAIS SQIRATSKTL GEDDCLGAKV EGSRLRYVDH HLRQQRALQQ LGMIQPNAWR  240
PQRGLPERAV SILRAWLFEH FLHPYPKDSD KVMLAKQTGL TRSQVSNWFI NARVRLWKPM  300
VEEMYMEEVK EQENNNNNNG SERSKESSKE LGSASNATTN NGAPDNNNNN NPVLDPIKVL  360
HQSKQECFNN NSSPTGAGEI SVNSSLSTSP MGGGVGSLQS HSGFHLAGSS DMQIRSPNKA  420
RNASEIMHNS PSSILSVDME MKHINGDHHR EPNSITGYGA FSMEDIGTRF SNXPVTDHHH  480
HQLASSRFQG NNGVSLTLGL PHNDNTVPIS ATQHGFLPQN MHSLGRRLEI GNNGNEFCVI  540
NNPSSSHPGP TYESIDIQNR KRFAAQLLHD FVA

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3k2a_A	2e-16	245	303	5	63	Homeobox protein Meis2
3k2a_B	2e-16	245	303	5	63	Homeobox protein Meis2
4xrs_A	1e-16	245	302	1	58	Homeobox protein Meis1
4xrs_B	1e-16	245	302	1	58	Homeobox protein Meis1
Search in ModeBase

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025614278.1	0.0	BEL1-like homeodomain protein 1
Swissprot	Q9SJ56	1e-124	BLH1_ARATH; BEL1-like homeodomain protein 1
TrEMBL	A0A445BWM2	0.0	A0A445BWM2_ARAHY; Uncharacterized protein
STRING	GLYMA13G38910.1	0.0	(Glycine max)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35940.3	1e-101	BEL1-like homeodomain 1

Publications ? help Back to Top
Duarte JM, et al. Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444]