PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy022885
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family B3
Protein Properties Length: 263aa    MW: 30983.3 Da    PI: 10.5365
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S58465410PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B345.91e-14392195
               EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SSSEE..EEE CS
         B3  1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.grsefelvvk 95
               ffk+ +++  +k   l l kkf++++g++   s  l l+ ++g +W+v+   ++++g ++++kGWkeFv    L+ g  + F+++ g+s     v+
  Ahy022885  3 FFKIILRKRLFKMETLKLTKKFTRQYGSV--LSNPLYLKPPDGTEWKVYW--TNHDGVILFKKGWKEFVAYYSLDHGHLLYFEYNiGTSH--IEVR 92
               899999999*****************988..7778***************..*******************************9733333..3444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.106.6E-16298IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086312.464397IPR003340B3 DNA binding domain
CDDcd100178.40E-13395No hitNo description
SMARTSM010192.9E-6397IPR003340B3 DNA binding domain
PfamPF023626.3E-12393IPR003340B3 DNA binding domain
SuperFamilySSF1019364.32E-163104IPR015300DNA-binding pseudobarrel domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    Send to blast
DQFFKIILRK RLFKMETLKL TKKFTRQYGS VLSNPLYLKP PDGTEWKVYW TNHDGVILFK  60
KGWKEFVAYY SLDHGHLLYF EYNIGTSHIE VRIHDMSCHQ IEYPANDHIK EQLPRRDQQP  120
VKRPKESKTR DVDSSPNTQN MRLNEEQQKK RLNEPLPGGV RGQPEKKMRA LVSSASKSRQ  180
LENDTQIRDG ERSLSSHGIK SKEKNHEVPV SVNQDSNGKR NRRRKDSESP VRPCPTRLES  240
LKEAKKFKWE KPSFIIKITQ RSQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016182342.11e-178B3 domain-containing transcription factor VRN1
RefseqXP_025682155.11e-178B3 domain-containing transcription factor VRN1
TrEMBLA0A444XAQ71e-173A0A444XAQ7_ARAHY; Uncharacterized protein
STRINGGLYMA09G20150.18e-35(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49475.18e-15B3 family protein