PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ahy022355 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | MYB | ||||||||
Protein Properties | Length: 179aa MW: 20747.2 Da PI: 10.7484 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.6 | 1.2e-17 | 13 | 60 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W+ +Ed+ l ++v+ +G g W ++a+ g++R++k+c+ rw++yl Ahy022355 13 KGAWSRDEDQTLSKYVAIHGEGKWQKVAQNAGLNRCGKSCRQRWLNYL 60 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 50.2 | 5.9e-16 | 66 | 110 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg +++E++ +++++++lG++ W++Ia++++ gRt++++k++w++ Ahy022355 66 RGDISQDEEDMIIRLHRLLGNR-WALIAKRLP-GRTDNEIKNYWNTN 110 67789*****************.*********.***********986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 25.531 | 8 | 64 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 5.19E-30 | 11 | 107 | IPR009057 | Homeodomain-like |
SMART | SM00717 | 3.0E-15 | 12 | 62 | IPR001005 | SANT/Myb domain |
Pfam | PF00249 | 8.2E-17 | 13 | 60 | IPR001005 | SANT/Myb domain |
Gene3D | G3DSA:1.10.10.60 | 2.9E-23 | 14 | 67 | IPR009057 | Homeodomain-like |
CDD | cd00167 | 1.20E-10 | 15 | 60 | No hit | No description |
SMART | SM00717 | 4.0E-16 | 65 | 113 | IPR001005 | SANT/Myb domain |
PROSITE profile | PS51294 | 20.716 | 65 | 115 | IPR017930 | Myb domain |
Pfam | PF00249 | 6.6E-15 | 66 | 111 | IPR001005 | SANT/Myb domain |
Gene3D | G3DSA:1.10.10.60 | 1.1E-24 | 68 | 116 | IPR009057 | Homeodomain-like |
CDD | cd00167 | 1.52E-11 | 70 | 111 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 179 aa Download sequence Send to blast |
MGRRPCCSKE MNKGAWSRDE DQTLSKYVAI HGEGKWQKVA QNAGLNRCGK SCRQRWLNYL 60 KPGIKRGDIS QDEEDMIIRL HRLLGNRWAL IAKRLPGRTD NEIKNYWNTN LSKKLQQQQQ 120 QWQPPPPSSS SSHKHKNNNL THKHVLVPPQ TPIPRRLKAF HYNNNDNNNN NTSISPCSX |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1h8a_C | 2e-28 | 10 | 115 | 24 | 128 | MYB TRANSFORMING PROTEIN |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Controls the expression of genes involved in anthocyanin biosynthesis. Regulates the expression of at least 3 structural genes: chalcone synthase, dihydroflavonol reductase and flavonol O(3) glucosyltransferase. C1 acts as a trans-acting factor. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015939186.1 | 1e-105 | transcription factor WER-like isoform X1 | ||||
Swissprot | P10290 | 4e-55 | MYBC_MAIZE; Anthocyanin regulatory C1 protein | ||||
TrEMBL | A0A445BMM8 | 1e-103 | A0A445BMM8_ARAHY; Uncharacterized protein | ||||
STRING | XP_007135451.1 | 3e-81 | (Phaseolus vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G16720.1 | 2e-53 | myb domain protein 7 |