PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy022263
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB_related
Protein Properties Length: 145aa    MW: 16890.4 Da    PI: 11.241
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59546410PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.61.4e-083685147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47
                     r +++  E e lv+av++lG+g+W+ +  +     k+Rt  ++k++w ++
        Ahy022263 36 RRPFSVAEVEALVQAVEKLGTGRWRDVKLRAFdnaKHRTYVDLKDKWKTL 85
                     678999********************9988889**************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.7333190IPR017930Myb domain
SMARTSM007172.0E-73588IPR001005SANT/Myb domain
PfamPF002497.1E-63685IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.8E-113686IPR009057Homeodomain-like
SuperFamilySSF466898.22E-1737118IPR009057Homeodomain-like
CDDcd116601.50E-173787No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    Send to blast
DSRALVTVPE MGVQALSLLP VPQKSKRPET VQRRIRRPFS VAEVEALVQA VEKLGTGRWR  60
DVKLRAFDNA KHRTYVDLKD KWKTLVHTAR ISPQQRRGEP VPQELLDRVL TAHAFWSQHQ  120
TKQQLNKQHQ QQQHQQQPQT CLLLQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2juh_A8e-61201251106Telomere binding protein TBP1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtBinds specifically to the plant telomeric double-stranded DNA sequences. At least 6 repeats of telomeric sequences are required for binding.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015935659.12e-97telomere repeat-binding protein 5 isoform X1
RefseqXP_015935660.12e-97telomere repeat-binding protein 5 isoform X1
RefseqXP_020984793.11e-97telomere repeat-binding protein 5 isoform X2
RefseqXP_020984795.19e-98telomere repeat-binding protein 5 isoform X4
RefseqXP_025613901.12e-97telomere repeat-binding protein 5 isoform X1
RefseqXP_025613902.12e-97telomere repeat-binding protein 5 isoform X2
RefseqXP_025613904.11e-97telomere repeat-binding protein 5 isoform X4
RefseqXP_025673775.12e-97telomere repeat-binding protein 5 isoform X1
RefseqXP_025673776.12e-97telomere repeat-binding protein 5 isoform X1
RefseqXP_025673777.12e-97telomere repeat-binding protein 5 isoform X2
RefseqXP_025673779.18e-98telomere repeat-binding protein 5 isoform X4
SwissprotQ6R0E35e-65TRP5_ARATH; Telomere repeat-binding protein 5
TrEMBLA0A445BVH51e-96A0A445BVH5_ARAHY; Uncharacterized protein
STRINGEOY340042e-72(Theobroma cacao)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07540.19e-54TRF-like 2