PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy021508

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

TALE

Protein Properties

Length: 607aa MW: 67813.6 Da PI: 6.6281

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S59546090	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.2	6.7e-09	379	416	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps ++ LA+++gL+ +qV++WF N R + Ahy021508 379 FEHflHPYPSDVDKHILARQTGLSRSQVSNWFINARVR 416 554459******************************88 PP
2	BELL	109.3	2.2e-35	241	311	2	72
BELL 2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 + elqk+k+kLls+leeVd+rYk y+ q+++v+ssFeavag g+a++Yt+lA+ka+S+ Fr+Lkdai++qi Ahy021508 241 FLELQKRKTKLLSMLEEVDRRYKNYRIQMKAVVSSFEAVAGNGAATVYTALAQKAMSKYFRNLKDAIMGQI 311 569******************************************************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00574	1.8E-50	186	309	IPR006563	POX domain
Pfam	PF07526	1.2E-41	191	308	IPR006563	POX domain
PROSITE profile	PS50071	12.082	357	420	IPR001356	Homeobox domain
SMART	SM00389	5.8E-9	360	424	IPR001356	Homeobox domain
CDD	cd00086	9.05E-12	360	421	No hit	No description
SuperFamily	SSF46689	4.15E-17	361	427	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	7.6E-28	363	427	IPR009057	Homeodomain-like
Pfam	PF05920	8.0E-18	377	416	IPR008422	Homeobox KN domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 607 aa Download sequence Send to blast
MARAVCEEKS REMVSSSGGF CYSGTTMEGL VGDPADMFNN LTSGMDMVGF SKNVEQQSDS 60 NNPHMWKALF GKQGPSSRSI NNDSSSASFY QQQQVDDDSS WQENRLVVDD SSLRCVFPCE 120 GNERPSQGLS LSLSSTNPSS IGLQSFELRQ TTHPHPHPQS QPYYAYQNFA NNNNKAAASS 180 SSTSAYQGHL MLKNSKYLVP AQDLLNEFCS LAIKHKSNNN NHQHWEDHDS SKKPSPTSIE 240 FLELQKRKTK LLSMLEEVDR RYKNYRIQMK AVVSSFEAVA GNGAATVYTA LAQKAMSKYF 300 RNLKDAIMGQ IQATRKAMGE KDPVAPGTTK GETPRLKIID QALRQQRAFQ QMSMMETHPW 360 RPQRGLPERS VSVLRAWLFE HFLHPYPSDV DKHILARQTG LSRSQVSNWF INARVRLWKP 420 MVEEMYMEEL KEQENMMASS EGADDPDLHL PSSRSEDQKP SVVVGMESDQ CASSSMLNNN 480 IKNDPKSSHN NPEEECLGRV MDTFGSVELD FSSYTQQQQQ QQGFNGVSLT LGLQQHGGSG 540 VSLAFPPPPV SSHHSSLFYA TTRDQIMDSC PPSSSSIVHH YSLVDGEPQN LPYRNLMGAQ 600 LLHDLAG

Sequence ? help Back to Top

Protein Sequence Length: 607 aa Download sequence Send to blast

MARAVCEEKS REMVSSSGGF CYSGTTMEGL VGDPADMFNN LTSGMDMVGF SKNVEQQSDS  60
NNPHMWKALF GKQGPSSRSI NNDSSSASFY QQQQVDDDSS WQENRLVVDD SSLRCVFPCE  120
GNERPSQGLS LSLSSTNPSS IGLQSFELRQ TTHPHPHPQS QPYYAYQNFA NNNNKAAASS  180
SSTSAYQGHL MLKNSKYLVP AQDLLNEFCS LAIKHKSNNN NHQHWEDHDS SKKPSPTSIE  240
FLELQKRKTK LLSMLEEVDR RYKNYRIQMK AVVSSFEAVA GNGAATVYTA LAQKAMSKYF  300
RNLKDAIMGQ IQATRKAMGE KDPVAPGTTK GETPRLKIID QALRQQRAFQ QMSMMETHPW  360
RPQRGLPERS VSVLRAWLFE HFLHPYPSDV DKHILARQTG LSRSQVSNWF INARVRLWKP  420
MVEEMYMEEL KEQENMMASS EGADDPDLHL PSSRSEDQKP SVVVGMESDQ CASSSMLNNN  480
IKNDPKSSHN NPEEECLGRV MDTFGSVELD FSSYTQQQQQ QQGFNGVSLT LGLQQHGGSG  540
VSLAFPPPPV SSHHSSLFYA TTRDQIMDSC PPSSSSIVHH YSLVDGEPQN LPYRNLMGAQ  600
LLHDLAG

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
4xrm_A	2e-15	366	424	5	63	Homeobox protein Meis2
4xrm_B	2e-15	366	424	5	63	Homeobox protein Meis2
Search in ModeBase

Functional Description ? help Back to Top
Source	Description
UniProt	Plays a major role in ovule patterning and in determination of integument identity via its interaction with MADS-box factors. Formation of complex with AG-SEP dimers negatively regulates the carpel identity process and favors the maintenance of ovule identity. BEL1-STM complex maintains the indeterminacy of the inflorescence meristem. Required, with SPL, for cytokinin-induced PIN1 expression in ovules (PubMed:22786869). {ECO:0000269\|PubMed:12244239, ECO:0000269\|PubMed:17693535, ECO:0000269\|PubMed:22786869}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016202132.1	0.0	homeobox protein BEL1 homolog
Refseq	XP_020978811.1	0.0	homeobox protein BEL1 homolog
Refseq	XP_025653793.1	0.0	homeobox protein BEL1 homolog
Refseq	XP_025653795.1	0.0	homeobox protein BEL1 homolog
Swissprot	Q38897	1e-127	BEL1_ARATH; Homeobox protein BEL1 homolog
TrEMBL	A0A445D691	0.0	A0A445D691_ARAHY; Uncharacterized protein
STRING	XP_007158519.1	0.0	(Phaseolus vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41410.1	1e-111	TALE family protein

Publications ? help Back to Top
Yamada T,Sasaki Y,Hashimoto K,Nakajima K,Gasser CS CORONA, PHABULOSA and PHAVOLUTA collaborate with BELL1 to confine WUSCHEL expression to the nucellus in Arabidopsis ovules. Development, 2016. 143(3): p. 422-6 [PMID:26700684] Lozano-Sotomayor P, et al. Altered expression of the bZIP transcription factor DRINK ME affects growth and reproductive development in Arabidopsis thaliana. Plant J., 2016. 88(3): p. 437-451 [PMID:27402171]