PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ahy020455 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | NAC | ||||||||
Protein Properties | Length: 150aa MW: 17713.4 Da PI: 10.0697 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 181.8 | 1.7e-56 | 3 | 128 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100 lppGfrFhPtdeel+++yL +kv ++++++ ++i+evd++++ePwdLp k+k +ekewyfF+ rd+ky+tg r+nrat++gyWkatgkdke+++ +++lv Ahy020455 3 LPPGFRFHPTDEELISHYLYNKVIDTNFSA-RAIAEVDLNRSEPWDLPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYR-GKSLV 100 79**************************99.89***************888999****************************************.999** PP NAM 101 glkktLvfykgrapkgektdWvmheyrl 128 g+kktLvfykgrapkgek+dWvmhe+rl Ahy020455 101 GMKKTLVFYKGRAPKGEKSDWVMHEFRL 128 **************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 6.41E-63 | 2 | 150 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 58.414 | 3 | 150 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.7E-29 | 4 | 128 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 150 aa Download sequence Send to blast |
MDLPPGFRFH PTDEELISHY LYNKVIDTNF SARAIAEVDL NRSEPWDLPW KAKMGEKEWY 60 FFCVRDRKYP TGLRTNRATE AGYWKATGKD KEIYRGKSLV GMKKTLVFYK GRAPKGEKSD 120 WVMHEFRLHG KFNPHNLPKS AKNEWVICRV |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 1e-53 | 1 | 150 | 15 | 162 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 1e-53 | 1 | 150 | 15 | 162 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 1e-53 | 1 | 150 | 15 | 162 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 1e-53 | 1 | 150 | 15 | 162 | NO APICAL MERISTEM PROTEIN |
3swm_A | 1e-53 | 1 | 150 | 18 | 165 | NAC domain-containing protein 19 |
3swm_B | 1e-53 | 1 | 150 | 18 | 165 | NAC domain-containing protein 19 |
3swm_C | 1e-53 | 1 | 150 | 18 | 165 | NAC domain-containing protein 19 |
3swm_D | 1e-53 | 1 | 150 | 18 | 165 | NAC domain-containing protein 19 |
3swp_A | 1e-53 | 1 | 150 | 18 | 165 | NAC domain-containing protein 19 |
3swp_B | 1e-53 | 1 | 150 | 18 | 165 | NAC domain-containing protein 19 |
3swp_C | 1e-53 | 1 | 150 | 18 | 165 | NAC domain-containing protein 19 |
3swp_D | 1e-53 | 1 | 150 | 18 | 165 | NAC domain-containing protein 19 |
4dul_A | 1e-53 | 1 | 150 | 15 | 162 | NAC domain-containing protein 19 |
4dul_B | 1e-53 | 1 | 150 | 15 | 162 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the promoter regions of genes involved in chlorophyll catabolic processes, such as NYC1, SGR1, SGR2 and PAO. {ECO:0000269|PubMed:27021284}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Repressed by the microRNA miR164. {ECO:0000269|PubMed:15294871, ECO:0000269|PubMed:17098808}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015937929.1 | 1e-111 | NAC domain-containing protein 100 | ||||
Refseq | XP_025616193.1 | 1e-111 | NAC domain-containing protein 100 | ||||
Swissprot | Q9FLJ2 | 1e-99 | NC100_ARATH; NAC domain-containing protein 100 | ||||
TrEMBL | A0A445C2C6 | 1e-109 | A0A445C2C6_ARAHY; Uncharacterized protein | ||||
STRING | GLYMA06G21020.1 | 1e-102 | (Glycine max) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61430.1 | 1e-102 | NAC domain containing protein 100 |
Publications ? help Back to Top | |||
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