PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy020163
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 267aa    MW: 29701.7 Da    PI: 7.1987
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59542456PU_refUnigeneView CDS
PUT-171a-Arachis_hypogaea-10048PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.63.9e-1279124555
                HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                h ++Er RR++i + f  L  l+P +     kK++Ka++L  A++Y+k+Lq
  Ahy020163  79 HIIAERMRREKISQQFIALSALIPGL-----KKMDKATVLGDAIKYVKQLQ 124
                899***********************.....9******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.58974123IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.89E-1778140IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.51E-1279128No hitNo description
Gene3DG3DSA:4.10.280.109.1E-1779136IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.1E-979124IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.7E-1480129IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    Send to blast
MISTEESWTT WLCDLEEEDY SFINGIIAAP NNYSNSQSQM SNNDNERPSK LPKSTTPTPR  60
RRRTGSAGTG RSPQHAHDHI IAERMRREKI SQQFIALSAL IPGLKKMDKA TVLGDAIKYV  120
KQLQEQVKVL ETESKRKSAE SVVYVEKSEV CGEEDVSVSD TWSNSGGDGN SSYEVSKAVS  180
RSVLPEVEAR VSEKNVLIRI HCEKHKGVLM HILKLIDKLH LSVLNTTSLP FGASIVDITI  240
TAEMDDKFSL SAKELARNIR VGVLQSM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5gnj_A2e-1378152880Transcription factor MYC2
5gnj_B2e-1378152880Transcription factor MYC2
5gnj_E2e-1378152880Transcription factor MYC2
5gnj_F2e-1378152880Transcription factor MYC2
5gnj_G2e-1378152880Transcription factor MYC2
5gnj_I2e-1378152880Transcription factor MYC2
5gnj_M2e-1378152880Transcription factor MYC2
5gnj_N2e-1378152880Transcription factor MYC2
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025652082.10.0transcription factor NAI1-like
RefseqXP_025698506.10.0transcription factor NAI1-like
TrEMBLA0A444ZAU11e-143A0A444ZAU1_ARAHY; Uncharacterized protein
STRINGGLYMA17G16730.16e-88(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22760.13e-49bHLH family protein