PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy018549
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 205aa    MW: 21705.4 Da    PI: 8.0578
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59548898PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.81.7e-122570555
               HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
               h+++Er RR+ri +++  L+el+P+a      K +Ka++L + ++Y+k Lq
  Ahy018549 25 HSIAERLRRERIAERMKALQELVPNA-----NKTDKASMLDEIIDYVKFLQ 70
               99***********************8.....6******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.09E-131874No hitNo description
SuperFamilySSF474591.31E-171880IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088817.392069IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.5E-172279IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.4E-102570IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.5E-132675IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    Send to blast
XNPNPNPGQP KQRVRARRGQ ATDPHSIAER LRRERIAERM KALQELVPNA NKTDKASMLD  60
EIIDYVKFLQ LQVKVLSMSR LGGAAAVAPL VADINSEGGG DCVQTNGNQT AGASSSNDSL  120
TMTEQQVAKL MEEDMGSAMQ YLQGKGLCLM PISLATAIST ATATCHPRNP IMNPTDGPSS  180
PGMSVLTVQS ANGDAVKDAT SVSKP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12934RLRRER
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By cold, UV, ethylene (ACC), flagellin, jasmonic acid (JA), and salicylic acid (SA) treatments. {ECO:0000269|PubMed:12679534}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015932806.11e-146transcription factor bHLH66
RefseqXP_016200149.11e-146transcription factor bHLH82
RefseqXP_025607566.11e-146transcription factor bHLH66
RefseqXP_025630583.11e-146transcription factor bHLH82
SwissprotQ9ZUG95e-89BH066_ARATH; Transcription factor bHLH66
TrEMBLA0A445AVG41e-145A0A445AVG4_ARAHY; Uncharacterized protein
STRINGXP_007138416.11e-108(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24260.11e-63LJRHL1-like 1
Publications ? help Back to Top
  1. Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
    Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
    Differentiation, 2010. 80(1): p. 1-8
    [PMID:20219281]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  3. Zhang J, et al.
    Sperm cells are passive cargo of the pollen tube in plant fertilization.
    Nat Plants, 2017. 3: p. 17079
    [PMID:28585562]