PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ahy018086 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | ERF | ||||||||
Protein Properties | Length: 523aa MW: 58800.4 Da PI: 4.6042 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.1 | 1e-18 | 107 | 163 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr++ +g+WvAeIr+p +n k+ kr +lg+f ta+eAa a+++a+k ++g Ahy018086 107 RYRGVRQRI-WGKWVAEIREPISNHeskKNaKRLWLGTFTTAFEAALAYDKAAKTMYG 163 59****998.**********65544576669***********************9987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 21.878 | 107 | 171 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 8.2E-34 | 107 | 177 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 2.08E-27 | 107 | 173 | No hit | No description |
Pfam | PF00847 | 6.5E-13 | 107 | 163 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 8.5E-18 | 107 | 171 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 2.9E-27 | 108 | 172 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 8.1E-9 | 108 | 119 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 8.1E-9 | 137 | 153 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 523 aa Download sequence Send to blast |
XTQTHNIPQN NELEQQQLIQ LHASSAAKSR KGIMATEVVS GNRNSSKRRR CGSDSLEDTL 60 EKWKKKNIDI QHDFSTNGVH VVHKVPAKGS KKGCMKGKGG PQNSEFRYRG VRQRIWGKWV 120 AEIREPISNH ESKKNAKRLW LGTFTTAFEA ALAYDKAAKT MYGSGARLNF PEHDLESVGS 180 EESPSKNGII LSSGEAPKAE DLDGNFHQFR EDKPNFSYVE AFEGTKEEDH DVQKNEKCDD 240 ASVVHKEMKD IEAKIPGESE GIEGESEEVL KCSGSGVEFT DMAMNSGADG TASDANEHEI 300 VANNIEVPIE ESTKSLTSSC DLSNIDNHCD DYFNNQISDE DCNPKPNYDQ SNIKNEAYMV 360 KKKHVEEVIS EILRLYSNKC SNNCIQSQNE NDENQPSVNA EEEKPLMPVE ADMVQTCNCY 420 GCDNSDDEIK NEPNGSDDNV GEMYEFQALN SNIDRKLELQ EKGDDGNVLS EFSSKRNRKL 480 CEHLNNMQVA SIEMDHDYSF LRPDYDFGLL EEQKFTCIYV FSL |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1gcc_A | 4e-19 | 108 | 171 | 3 | 60 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016184013.1 | 0.0 | uncharacterized protein LOC107625804 | ||||
Refseq | XP_025633836.1 | 0.0 | uncharacterized protein LOC112728069 | ||||
TrEMBL | A0A445AKV4 | 0.0 | A0A445AKV4_ARAHY; Uncharacterized protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G11020.1 | 4e-31 | DRE/CRT-binding protein 2B |