PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy017853
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family NF-YC
Protein Properties Length: 225aa    MW: 24211.7 Da    PI: 4.3679
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59550175PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC46.67.4e-15201001897
      NF-YC  18 nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtd.ifdflvdivp 97 
                + e+P  r+kki++ d+dv+++s ea  l+s++ elf+  l+ +s   a e+kr+t+    +  av+r +   dfl+d  p
  Ahy017853  20 RPEFPTGRVKKIMRLDKDVNRVSGEALFLVSRSTELFLHFLAQKSARVAIEKKRKTVTLDHLRVAVKRHQpSSDFLLDSLP 100
                5689**************************************************************9986368*****987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF471136.04E-181788IPR009072Histone-fold
PfamPF008087.1E-192285IPR003958Transcription factor CBF/NF-Y/archaeal histone domain
Gene3DG3DSA:1.10.20.101.6E-1923100IPR009072Histone-fold
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    Send to blast
MAEDEVQIQE NEDHPDPNSR PEFPTGRVKK IMRLDKDVNR VSGEALFLVS RSTELFLHFL  60
AQKSARVAIE KKRKTVTLDH LRVAVKRHQP SSDFLLDSLP LPSEPKNLPP STAADRRKAD  120
KPAPAGTRRI DQFFRKPEVQ VAPAADPEAE APAEADAEAK DAPEADSEAQ AAPVEDPEAE  180
PSAEADAEAK TAPEADSEAQ ATGAEADAGA EVAAEAEAAV HVDEC
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015943745.11e-117DNA polymerase epsilon subunit C
RefseqXP_025622531.11e-117transcription regulator complex subunit bur6
TrEMBLA0A445B9V01e-116A0A445B9V0_ARAHY; Uncharacterized protein
STRINGXP_007163752.13e-54(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43250.18e-36nuclear factor Y, subunit C13