PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ahy017581 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | B3 | ||||||||
Protein Properties | Length: 102aa MW: 11718.3 Da PI: 4.7024 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 44.9 | 2.1e-14 | 10 | 101 | 1 | 97 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--.TT-EEEEEE-SSSEE..EEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLk.egDfvvFkldgrsefelvvkvf 97 ffkv+ ++s l lp ++++ +k++ + + +l++ +g W+vk + ++++++ +GWkeFv++ng++ + ++vF dg+s+f +k+f Ahy017581 10 FFKVF--LPQFSSEKLLLPEEHVALTRMKERVPEEFILRNGRGGAWRVKT--SCIGEKVYFDDGWKEFVSDNGIQeACVIIVFNPDGSSTF--EFKIF 101 88999..77899999********88899999999****************..888888*****************4455678998887888..66655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.40.330.10 | 1.4E-17 | 4 | 102 | IPR015300 | DNA-binding pseudobarrel domain |
SuperFamily | SSF101936 | 6.47E-15 | 5 | 101 | IPR015300 | DNA-binding pseudobarrel domain |
PROSITE profile | PS50863 | 11.843 | 8 | 102 | IPR003340 | B3 DNA binding domain |
CDD | cd10017 | 3.05E-10 | 9 | 101 | No hit | No description |
SMART | SM01019 | 0.0015 | 10 | 102 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 1.8E-12 | 10 | 101 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 102 aa Download sequence Send to blast |
MNTSAEQSSF FKVFLPQFSS EKLLLPEEHV ALTRMKERVP EEFILRNGRG GAWRVKTSCI 60 GEKVYFDDGW KEFVSDNGIQ EACVIIVFNP DGSSTFEFKI FE |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020973590.1 | 1e-68 | B3 domain-containing protein At5g60130 | ||||
Refseq | XP_020973591.1 | 1e-68 | B3 domain-containing protein At5g60130 | ||||
Refseq | XP_020973592.1 | 1e-68 | B3 domain-containing protein At5g60130 | ||||
TrEMBL | A0A445A8V7 | 1e-64 | A0A445A8V7_ARAHY; Uncharacterized protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G06160.1 | 2e-12 | B3 family protein |