PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ahy016417 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | GRAS | ||||||||
Protein Properties | Length: 195aa MW: 21544 Da PI: 6.2115 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 39.8 | 6.7e-13 | 98 | 194 | 1 | 99 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlsel..aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98 lv+ L++cA+ ++ g+ + a +l+ ++ l +++++ ++aa+f L +r++ + l + + +e ++ f+e++P+lkf+h+ta Ahy016417 98 LVHMLISCADSLQRGHVAHAASLIDAMQSLqrHVTTASAIGKVAAHFIGTLTRRIFA--PPLTERHGGVGAV--ANDEGGVLYHHFYEACPYLKFAHFTA 193 689**********************9999964566669******************9..6665555333333..25667778899*************** PP GRAS 99 N 99 N Ahy016417 194 N 194 9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50985 | 11.993 | 72 | 195 | IPR005202 | Transcription factor GRAS |
Pfam | PF03514 | 2.3E-10 | 98 | 194 | IPR005202 | Transcription factor GRAS |
Sequence ? help Back to Top |
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Protein Sequence Length: 195 aa Download sequence Send to blast |
MVVDEGLLHD IMLNSPSLHH LPQTTHYNYN YNYNPFDDTT VSWINDAVSS PSQSQLTTTA 60 LHLPPPPPPP PLIDHQQTEL LLPTEQQQQV EEDSAIRLVH MLISCADSLQ RGHVAHAASL 120 IDAMQSLQRH VTTASAIGKV AAHFIGTLTR RIFAPPLTER HGGVGAVAND EGGVLYHHFY 180 EACPYLKFAH FTANX |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016179954.1 | 1e-139 | DELLA protein GAI1-like | ||||
Refseq | XP_025684459.1 | 1e-139 | DELLA protein GAI1 | ||||
TrEMBL | A0A444WXP6 | 1e-137 | A0A444WXP6_ARAHY; Uncharacterized protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01570.1 | 1e-17 | GRAS family protein |