PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy016292
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family AP2
Protein Properties Length: 356aa    MW: 39152.2 Da    PI: 9.8944
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S58471069PU_refUnigeneView CDS
PUT-171a-Arachis_hypogaea-15252PU_unrefplantGDBView CDS
PUT-171a-Arachis_hypogaea-20517PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.81.7e-151372155
        AP2  1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55
               s y+GV++++++gr++A+++d  +   g  ++ ++++lg ++ +e+Aa+a++ a++k++g
  Ahy016292 13 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqsRKgRQVYLGGYDKEEKAARAYDLAALKYWG 72
               57*******************666664477446*************************98 PP
2AP2483.2e-15115166155
        AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                s y+GV+++++ grW A+I  +     +k  +lg+f t eeAa+a++ a+ k++g
  Ahy016292 115 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 166
                57****************988532...5************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.7E-121372IPR001471AP2/ERF domain
CDDcd000181.28E-211382No hitNo description
SuperFamilySSF541717.19E-181382IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.7E-161481IPR001471AP2/ERF domain
PROSITE profilePS5103219.231480IPR001471AP2/ERF domain
SMARTSM003803.5E-291486IPR001471AP2/ERF domain
PRINTSPR003671.1E-61526IPR001471AP2/ERF domain
PfamPF008473.9E-10115166IPR001471AP2/ERF domain
SuperFamilySSF541714.05E-18115176IPR016177DNA-binding domain
CDDcd000186.28E-24115176No hitNo description
Gene3DG3DSA:3.30.730.102.0E-18116175IPR001471AP2/ERF domain
PROSITE profilePS5103219.045116174IPR001471AP2/ERF domain
SMARTSM003801.5E-33116180IPR001471AP2/ERF domain
PRINTSPR003671.1E-6156176IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    Send to blast
XKKTVDTFGQ RTSIYRGVTR HRWTGRYEAH LWDNSCRREG QSRKGRQVYL GGYDKEEKAA  60
RAYDLAALKY WGPTTTTNFP VSNYERELEE MKNMTRQEFV ASLRRKSSGF SRGASIYRGV  120
TRHHQHGRWQ ARIGRVAGNK DLYLGTFSTQ EEAAEAYDIA AIKFRGLNAV TNFDMSRYDV  180
KSIASSTLPI GGLSNKNKNS ADDPVVSQPP PPPPPPSSST LSFAIPIKQD PSADYWSIIG  240
YSNNTQLESA RGTTVIAPAA TSFPRPNNNG NGMMDFSAAP SADGFLNGGG IFVHHHQQES  300
GGGSSPSSGG SSIPLATPIF TLNSNNNYEN WIGPTLHTFQ AHAKPSLFQT PIFGME
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). Involved in the regulation of floral organs size. {ECO:0000250, ECO:0000269|PubMed:15988559}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016201259.10.0AP2-like ethylene-responsive transcription factor AIL5
RefseqXP_025630760.10.0AP2-like ethylene-responsive transcription factor AIL5
SwissprotQ6PQQ31e-137AIL5_ARATH; AP2-like ethylene-responsive transcription factor AIL5
TrEMBLA0A445AV390.0A0A445AV39_ARAHY; Uncharacterized protein
STRINGXP_007154750.10.0(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57390.11e-132AINTEGUMENTA-like 5
Publications ? help Back to Top
  1. Todd J,Post-Beittenmiller D,Jaworski JG
    KCS1 encodes a fatty acid elongase 3-ketoacyl-CoA synthase affecting wax biosynthesis in Arabidopsis thaliana.
    Plant J., 1999. 17(2): p. 119-30
    [PMID:10074711]
  2. Molitor AM,Bu Z,Yu Y,Shen WH
    Arabidopsis AL PHD-PRC1 complexes promote seed germination through H3K4me3-to-H3K27me3 chromatin state switch in repression of seed developmental genes.
    PLoS Genet., 2014. 10(1): p. e1004091
    [PMID:24465219]
  3. Feng J,Chen D,Berr A,Shen WH
    ZRF1 Chromatin Regulators Have Polycomb Silencing and Independent Roles in Development.
    Plant Physiol., 2016. 172(3): p. 1746-1759
    [PMID:27630184]
  4. Santuari L, et al.
    The PLETHORA Gene Regulatory Network Guides Growth and Cell Differentiation in Arabidopsis Roots.
    Plant Cell, 2016. 28(12): p. 2937-2951
    [PMID:27920338]
  5. Du Y,Scheres B
    PLETHORA transcription factors orchestrate de novo organ patterning during Arabidopsis lateral root outgrowth.
    Proc. Natl. Acad. Sci. U.S.A., 2017. 114(44): p. 11709-11714
    [PMID:29078398]