PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ahy014362 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | C2H2 | ||||||||
Protein Properties | Length: 100aa MW: 11397.1 Da PI: 6.1394 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 18.9 | 4.1e-06 | 18 | 40 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+ksF++ +L H+r+H Ahy014362 18 HVCKFCNKSFPSGRSLGGHMRSH 40 79********************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF57667 | 1.1E-6 | 17 | 46 | No hit | No description |
Pfam | PF13912 | 7.1E-10 | 17 | 40 | IPR007087 | Zinc finger, C2H2 |
PROSITE profile | PS50157 | 10.305 | 18 | 45 | IPR007087 | Zinc finger, C2H2 |
Gene3D | G3DSA:3.30.160.60 | 1.8E-4 | 18 | 40 | IPR013087 | Zinc finger C2H2-type/integrase DNA-binding domain |
SMART | SM00355 | 0.0025 | 18 | 40 | IPR015880 | Zinc finger, C2H2-like |
PROSITE pattern | PS00028 | 0 | 20 | 40 | IPR007087 | Zinc finger, C2H2 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003676 | Molecular Function | nucleic acid binding | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 100 aa Download sequence Send to blast |
MEEEDHHHQE QEQELMRHVC KFCNKSFPSG RSLGGHMRSH VTNNTHEAEE KEKLSSSEAG 60 TITNNSSGYG LRENPKKTWR IIADSSTNSE DNNNNNNNNN |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016177013.1 | 1e-64 | zinc finger protein ZAT9-like | ||||
Refseq | XP_025629421.1 | 1e-64 | zinc finger protein ZAT9 | ||||
TrEMBL | A0A445AZJ6 | 3e-63 | A0A445AZJ6_ARAHY; Uncharacterized protein | ||||
STRING | XP_004508691.1 | 4e-22 | (Cicer arietinum) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G26610.1 | 5e-13 | C2H2-like zinc finger protein |