PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy014311
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family B3
Protein Properties Length: 458aa    MW: 51472.3 Da    PI: 8.7277
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S58465913PU_refUnigeneView CDS
PUT-171a-Arachis_hypogaea-14684PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B357.13.4e-1829115498
                E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
         B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                +++ps+++++  l lpk f  + +  k+ +  ++l+ + g  W++ l  + + ++ ++t GWk+Fvk++ L e+Df+vFk++g+s+f   v +f+
  Ahy014311  29 KFMPSSYNQH--LALPKAFYGNLK--KKLPENVSLRGPGGALWNIGL--TTREDTLYFTHGWKQFVKDHSLIENDFLVFKFNGESTF--DVLIFD 115
                4556666555..99*****95444..558889***************..999999*************************9998888..888887 PP
2B339.69.5e-13316400390
                EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
         B3   3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                 v+ p +v k+  ++lp+k + +h   ++++++++l+  +  +W  k++y + +++  l++GWk+F  +n+L+e D++vFk  g ++ 
  Ahy014311 316 VVMRPTHVYKRFFVSLPNKWILQHI--PPRTQDIILRVVH-SEWLAKYSYHNPRNTGGLSGGWKRFTLDNNLEEYDVCVFKPGGLMNN 400
                578899***************9995..3455678877755.69*******88888889***********************5443444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019362.75E-2223116IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086315.35424117IPR003340B3 DNA binding domain
CDDcd100177.57E-1926115No hitNo description
Gene3DG3DSA:2.40.330.102.7E-2226115IPR015300DNA-binding pseudobarrel domain
SMARTSM010197.6E-1627117IPR003340B3 DNA binding domain
PfamPF023627.3E-1528115IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.105.3E-16313410IPR015300DNA-binding pseudobarrel domain
CDDcd100171.91E-17313410No hitNo description
PROSITE profilePS508639.925314412IPR003340B3 DNA binding domain
SMARTSM010191.1E-12314412IPR003340B3 DNA binding domain
SuperFamilySSF1019361.96E-15314401IPR015300DNA-binding pseudobarrel domain
PfamPF023625.2E-11316401IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 458 aa     Download sequence    Send to blast
MEGSEISHHN RSWVEDIYWN HFQFLHFAKF MPSSYNQHLA LPKAFYGNLK KKLPENVSLR  60
GPGGALWNIG LTTREDTLYF THGWKQFVKD HSLIENDFLV FKFNGESTFD VLIFDGKNFC  120
EKAAAYFVRN VGNGNPENGI GRLTMRKDTE NSNAGVACAS PQKSVHVNSF PVPDAVPVRT  180
EPPSERNFNG DVEFSTPKEV VNVDGDAGVE VDANGVTMSE GRTRTTGKRI RKPTQAFNHF  240
QTKRRPVRVT KTSNAHKEVA NVVIDADADP EPASAGKSEG GNYELYVSQR RPVTEEEMNS  300
TLQMAKAACT DDSLCVVMRP THVYKRFFVS LPNKWILQHI PPRTQDIILR VVHSEWLAKY  360
SYHNPRNTGG LSGGWKRFTL DNNLEEYDVC VFKPGGLMNN TLILDVNIFR VVEEIKPLTQ  420
VRAAGSAKKS GKEKGLKGHP NIIEPLLLSH LCGYFMLS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025607056.10.0B3 domain-containing protein REM16-like
RefseqXP_025660453.10.0B3 domain-containing protein REM16-like
TrEMBLA0A444YWI60.0A0A444YWI6_ARAHY; Uncharacterized protein
STRINGGLYMA17G36490.21e-154(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.13e-38B3 family protein