PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy013618
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family B3
Protein Properties Length: 279aa    MW: 32511 Da    PI: 10.3321
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59552478PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B340.64.7e-1332111185
                EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS
         B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 
                ffk+ +++ +l++ ++ l kkf++++g++  ++  l l+ ++g +W+v+   +k++g+++++kGWkeFv    L+ g  + F+++
  Ahy013618  32 FFKIILRK-ALQNENFKLTKKFTTQYGSVVSNP--LYLKPRDGIEWKVYW--TKHDGAILFKKGWKEFVAYYSLDHGHLLWFEYN 111
                55655444.455556***********9996665..***************..*******************************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.103.4E-1624126IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019362.75E-1527125IPR015300DNA-binding pseudobarrel domain
CDDcd100173.27E-831123No hitNo description
PROSITE profilePS5086310.831125IPR003340B3 DNA binding domain
SMARTSM010192.5E-532125IPR003340B3 DNA binding domain
PfamPF023626.1E-1033111IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    Send to blast
XIIKSIHHSF AMASSSRQQN KHSPSTSTET SFFKIILRKA LQNENFKLTK KFTTQYGSVV  60
SNPLYLKPRD GIEWKVYWTK HDGAILFKKG WKEFVAYYSL DHGHLLWFEY NIGTSYIEVR  120
IYDMSCHEIK YPANDQIKEQ SPCRGQQPVK RPKEPKIIDV DSSPNTQNMR LNEGQQKKRL  180
NEPRSGRVRS QPEKKNESTE XLVSSASKSR QLEDDTQIRN VERSLNSHDI KSNEKNYEMP  240
VSVNRDSNGK RNRRRKGSES PVMPCLTRLE SLKEAKKFX
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025624972.10.0B3 domain-containing transcription factor VRN1
TrEMBLA0A445B0T90.0A0A445B0T9_ARAHY; Uncharacterized protein
TrEMBLA0A445B0V00.0A0A445B0V0_ARAHY; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49475.12e-13B3 family protein