PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy013419
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB
Protein Properties Length: 272aa    MW: 31055.9 Da    PI: 8.6705
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59551682PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.74.8e-173178148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT +Ed +l +++  +G g+W+++ar  g++R++k+c++rw++yl
        Ahy013419 31 KGPWTVDEDAILTNYISTHGEGHWNSVARSAGLKRSGKSCRLRWLNYL 78
                     79********************************************97 PP
2Myb_DNA-binding47.63.9e-1584127146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ T +E+ l++d++ ++G++ W++Ia++++ gRt++++k++w++
        Ahy013419  84 RGNITLQEQILILDLHFRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 127
                      7899******************.*********.***********96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129422.3352682IPR017930Myb domain
SuperFamilySSF466896.36E-3028125IPR009057Homeodomain-like
SMARTSM007172.2E-143080IPR001005SANT/Myb domain
PfamPF002492.4E-153178IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.602.4E-213285IPR009057Homeodomain-like
CDDcd001676.12E-103378No hitNo description
PROSITE profilePS5129416.96583133IPR017930Myb domain
SMARTSM007174.1E-1383131IPR001005SANT/Myb domain
PfamPF002491.6E-1384127IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.603.6E-2186131IPR009057Homeodomain-like
CDDcd001672.77E-988127No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    Send to blast
LYYTIHMDVK VIKKSEGSQV QQLANEMGLR KGPWTVDEDA ILTNYISTHG EGHWNSVARS  60
AGLKRSGKSC RLRWLNYLRP DVRRGNITLQ EQILILDLHF RWGNRWSKIA QHLPGRTDNE  120
IKNYWRTRVI KQAKQLKCDV NSKQFRDALR YVWMPRLLER LHPAPQKLTN QTEPETQTGV  180
LVSNRNGSDS GPLLCAKQSN CLSDSSSGQN VSVGNQWSSF NNQLLFEQGT NENGHGCGGG  240
GESLECLWND ENVWFLQQQL CDDLEVKFNS LA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1h8a_C4e-222912525120MYB TRANSFORMING PROTEIN
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor involved in abiotic stress responses. Plays a regulatory role in tolerance to salt, cold, and drought stresses. Regulates positively the expression of genes involved in proline synthesis and transport, and genes involved in reactive oxygen species (ROS) scavenging such as peroxidase, superoxide dismutase and catalase during salt stress. Transactivates stress-related genes, including LEA3, RAB16A and DREB2A during salt stress. {ECO:0000269|PubMed:22301384}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by salt, cold and osmotic stresses, and abscisic acid (ABA). Down-regulated by salicylic acid (SA). {ECO:0000269|PubMed:22301384}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025618640.10.0transcription factor MYB2
SwissprotQ10MB48e-81MYB2_ORYSJ; Transcription factor MYB2
TrEMBLA0A444XI220.0A0A444XI22_ARAHY; Uncharacterized protein
STRINGGLYMA10G01330.11e-103(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G48000.12e-77myb domain protein 112
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Yang A,Dai X,Zhang WH
    A R2R3-type MYB gene, OsMYB2, is involved in salt, cold, and dehydration tolerance in rice.
    J. Exp. Bot., 2012. 63(7): p. 2541-56
    [PMID:22301384]
  3. Chen X, et al.
    The NAC family transcription factor OsNAP confers abiotic stress response through the ABA pathway.
    Plant Cell Physiol., 2014. 55(3): p. 604-19
    [PMID:24399239]
  4. Lv Y, et al.
    New insights into the genetic basis of natural chilling and cold shock tolerance in rice by genome-wide association analysis.
    Plant Cell Environ., 2016. 39(3): p. 556-70
    [PMID:26381647]
  5. Hong Y,Zhang H,Huang L,Li D,Song F
    Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice.
    Front Plant Sci, 2016. 7: p. 4
    [PMID:26834774]