PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy013296

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

TALE

Protein Properties

Length: 664aa MW: 72485.8 Da PI: 7.4816

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S59538441	PU_ref	Unigene	View CDS
PUT-171a-Arachis_hypogaea-3226	PU_unref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.4	1.4e-09	374	411	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gLt +qV++WF N R + Ahy013296 374 FEHflHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVR 411 564459******************************88 PP
2	BELL	123.7	7.4e-40	235	306	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 erqe+q+kkakL+++l+eV++rY+qy++q+q+vissFe++ag+gsa+ Yt+lAl++iS++FrcLkdai++qi Ahy013296 235 ERQEIQMKKAKLITMLDEVEQRYRQYHNQMQIVISSFEQAAGIGSARTYTALALQTISKQFRCLKDAITGQI 306 79*********************************************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00574	1.3E-61	155	304	IPR006563	POX domain
Pfam	PF07526	1.0E-49	160	303	IPR006563	POX domain
PROSITE profile	PS50071	12.195	352	415	IPR001356	Homeobox domain
CDD	cd00086	9.91E-12	355	416	No hit	No description
SMART	SM00389	5.3E-9	355	419	IPR001356	Homeobox domain
SuperFamily	SSF46689	5.99E-17	356	422	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	9.5E-29	358	421	IPR009057	Homeodomain-like
Pfam	PF05920	2.7E-18	372	411	IPR008422	Homeobox KN domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 664 aa Download sequence Send to blast
MATYFHGNSE IQGGGVDGGL QTLVLMNPGY IQFSDTPPPP PPHGGNLMLL NSLAAAGNSS 60 LASHAPLSQQ FLGVPLAAEH MHGHHDVSVA LHGYAPRGHY NLWNTIDPTT AARDATRATQ 120 GLSLSLPAMS GDEVRVSGGS PSSASGVTNG GGGVSGIQSV LLNSKYLRAT QELLEEVVNV 180 NNNNDVNNNN NMKKKSFEKA KVGVGESSSN GGNSGGDGSV GEGSEKRCAE LSTTERQEIQ 240 MKKAKLITML DEVEQRYRQY HNQMQIVISS FEQAAGIGSA RTYTALALQT ISKQFRCLKD 300 AITGQIKAAN KSLGEEDYFG GGGGKIEGSR LKYVDHHLRQ QRAIQQLGMM HHNAWRPQRG 360 LPERSVSVLR AWLFEHFLHP YPKDSDKHML AKQTGLTRSQ VSNWFINARV RLWKPMVEEM 420 YLEEMKDHDM NNSNNNNVSE DNKSSKSNED PNNAKNSPPR DSNSESDTKK SFNSKQENVS 480 ISTPTSQIGG NSRNNNNNNS SGFSFMGSSE LLDGITQGSS PKKPRSNEIV HHSQNNNNNN 540 NNNNEYSFIN NVGNQTNFIG GFGQYPIDEI ARFDAAAAEN FTRFSGNNNH SNNNGVSLTL 600 GLPHCDTFQN IQLGRRLDRM SGEQHSNEFG AVNNTQNPHH SSAAFQSMQN SKRFAAQLLP 660 DYVA

Sequence ? help Back to Top

Protein Sequence Length: 664 aa Download sequence Send to blast

MATYFHGNSE IQGGGVDGGL QTLVLMNPGY IQFSDTPPPP PPHGGNLMLL NSLAAAGNSS  60
LASHAPLSQQ FLGVPLAAEH MHGHHDVSVA LHGYAPRGHY NLWNTIDPTT AARDATRATQ  120
GLSLSLPAMS GDEVRVSGGS PSSASGVTNG GGGVSGIQSV LLNSKYLRAT QELLEEVVNV  180
NNNNDVNNNN NMKKKSFEKA KVGVGESSSN GGNSGGDGSV GEGSEKRCAE LSTTERQEIQ  240
MKKAKLITML DEVEQRYRQY HNQMQIVISS FEQAAGIGSA RTYTALALQT ISKQFRCLKD  300
AITGQIKAAN KSLGEEDYFG GGGGKIEGSR LKYVDHHLRQ QRAIQQLGMM HHNAWRPQRG  360
LPERSVSVLR AWLFEHFLHP YPKDSDKHML AKQTGLTRSQ VSNWFINARV RLWKPMVEEM  420
YLEEMKDHDM NNSNNNNVSE DNKSSKSNED PNNAKNSPPR DSNSESDTKK SFNSKQENVS  480
ISTPTSQIGG NSRNNNNNNS SGFSFMGSSE LLDGITQGSS PKKPRSNEIV HHSQNNNNNN  540
NNNNEYSFIN NVGNQTNFIG GFGQYPIDEI ARFDAAAAEN FTRFSGNNNH SNNNGVSLTL  600
GLPHCDTFQN IQLGRRLDRM SGEQHSNEFG AVNNTQNPHH SSAAFQSMQN SKRFAAQLLP  660
DYVA

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
4xrs_A	2e-16	361	418	1	58	Homeobox protein Meis1
4xrs_B	2e-16	361	418	1	58	Homeobox protein Meis1
5bng_A	3e-16	361	419	1	59	Homeobox protein Meis2
5bng_B	3e-16	361	419	1	59	Homeobox protein Meis2
Search in ModeBase

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025634823.1	0.0	BEL1-like homeodomain protein 1
Refseq	XP_025634824.1	0.0	BEL1-like homeodomain protein 1
Refseq	XP_025634825.1	0.0	BEL1-like homeodomain protein 1
Refseq	XP_025634826.1	0.0	BEL1-like homeodomain protein 1
Refseq	XP_025634827.1	0.0	BEL1-like homeodomain protein 1
Refseq	XP_025662105.1	0.0	BEL1-like homeodomain protein 1
Refseq	XP_025662110.1	0.0	BEL1-like homeodomain protein 1
Refseq	XP_025662117.1	0.0	BEL1-like homeodomain protein 1
Refseq	XP_025662123.1	0.0	BEL1-like homeodomain protein 1
Refseq	XP_025662129.1	0.0	BEL1-like homeodomain protein 1
Swissprot	Q9SJ56	1e-162	BLH1_ARATH; BEL1-like homeodomain protein 1
TrEMBL	A0A0K2CTJ9	0.0	A0A0K2CTJ9_SOYBN; Homeodomain/HOMEOBOX transcription factor (Fragment)
TrEMBL	A0A445IJM4	0.0	A0A445IJM4_GLYSO; BEL1-like homeodomain protein 1 isoform A
TrEMBL	I1L9K6	0.0	I1L9K6_SOYBN; Uncharacterized protein
STRING	GLYMA10G10040.2	0.0	(Glycine max)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35940.3	1e-119	BEL1-like homeodomain 1

Publications ? help Back to Top
Duarte JM, et al. Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444]