PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy013268
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family ZF-HD
Protein Properties Length: 284aa    MW: 30317.4 Da    PI: 6.7845
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S58449211PU_unrefUnigeneView CDS
gnl|UG|Ahy#S59542549PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer96.22.7e-3055110258
  ZF-HD_dimer   2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 
                  ++vrY+eC+kNhA+s GghavDGC+Efm++ ge+g+ +a+ CaAC+CHRnFHR+e +
    Ahy013268  55 SSVRYRECQKNHAVSFGGHAVDGCCEFMAA-GEDGSLEAVICAACNCHRNFHRKEID 110
                  579**************************9.999********************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF047707.9E-2857109IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
TIGRFAMsTIGR015661.9E-2658109IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
ProDomPD1257742.0E-1958111IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profilePS5152327.10259108IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
SuperFamilySSF466891.47E-19194265IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.605.1E-30199266IPR009057Homeodomain-like
TIGRFAMsTIGR015654.1E-24207264IPR006455Homeodomain, ZF-HD class
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    Send to blast
MEFDEQEEQE EELGIPEAPQ SQATQASYDS LGNSAKLTGD GTAASGFGRK GAAASSVRYR  60
ECQKNHAVSF GGHAVDGCCE FMAAGEDGSL EAVICAACNC HRNFHRKEID GDIRGGSGAG  120
TLHHHRPQPP PPHLHQFSPY YHHRGPPYPA GYLHHLATPP MAQHRPLALP AAVSGGGLSR  180
DEEDMSNPSS SGGGGGGGGC GGSGSSKKRF RTKFTQEQKD KMLAFAEQVG WRIQKQDEAM  240
VEQFCAEACV KRSVLKVWMH NNKNTLVTGE SGGVESEKAN GRTN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wh7_A5e-262062731680ZF-HD homeobox family protein
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor. {ECO:0000250}.
UniProtPutative transcription factor. {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025610386.10.0zinc-finger homeodomain protein 2 isoform X1
SwissprotA2Z2596e-66ZHD1_ORYSI; Zinc-finger homeodomain protein 1
SwissprotQ6YXH56e-66ZHD1_ORYSJ; Zinc-finger homeodomain protein 1
TrEMBLA0A445CGD60.0A0A445CGD6_ARAHY; Uncharacterized protein
STRINGXP_007141241.11e-109(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.12e-61homeobox protein 22
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]