PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ahy013266 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | ERF | ||||||||
Protein Properties | Length: 170aa MW: 18798.1 Da PI: 7.4101 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.8 | 2.7e-18 | 21 | 70 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr ++ +g+Wv+eIr+p++ + r++lg+f +e+Aaka++ a+ +l+g Ahy013266 21 LYRGVRKRR-WGKWVSEIREPRK---KSRIWLGSFPVPEMAAKAYDVAAYCLKG 70 69****887.**********843...6*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 1.62E-30 | 20 | 80 | No hit | No description |
Pfam | PF00847 | 3.2E-12 | 20 | 70 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 5.6E-31 | 21 | 79 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 23.538 | 21 | 78 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.0E-34 | 21 | 84 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 4.12E-21 | 21 | 80 | IPR016177 | DNA-binding domain |
PRINTS | PR00367 | 1.1E-12 | 22 | 33 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.1E-12 | 60 | 80 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 170 aa Download sequence Send to blast |
MEQHHLPPPT NNTRGGTRHP LYRGVRKRRW GKWVSEIREP RKKSRIWLGS FPVPEMAAKA 60 YDVAAYCLKG RKAQLNFPDQ VHLLPPLPST CSARDIQVAA AKAANSVKDS VASTRGGADD 120 EDDFWGEIEL PELMDGECGC WSSPSGSSWT TSSGDITAWS EVEQPFTACL |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 3e-18 | 16 | 83 | 9 | 77 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025603375.1 | 1e-125 | ethylene-responsive transcription factor ERF023 | ||||
Swissprot | Q1ECI2 | 1e-51 | ERF23_ARATH; Ethylene-responsive transcription factor ERF023 | ||||
TrEMBL | A0A445CPI2 | 1e-123 | A0A445CPI2_ARAHY; Uncharacterized protein | ||||
STRING | XP_004494833.1 | 4e-72 | (Cicer arietinum) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01250.1 | 2e-53 | ERF family protein |
Publications ? help Back to Top | |||
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