PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||
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TF ID | Ahy012805 | ||||||||||||
Organism | |||||||||||||
Taxonomic ID | |||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | NAC | ||||||||||||
Protein Properties | Length: 250aa MW: 28302.1 Da PI: 9.4939 | ||||||||||||
Description | NAC family protein | ||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 182.8 | 8.1e-57 | 17 | 143 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100 lppGfrFhPtdeel+++yL kkv ++++ + ++i evd++++ePwdLp k+k +ekewyfF+ rd+ky+tg r+nrat+sgyWkatgkdke+++ +++lv Ahy012805 17 LPPGFRFHPTDEELITHYLYKKVIDTNFAA-RAIGEVDLNRCEPWDLPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATESGYWKATGKDKEIFR-GKSLV 114 79*************************999.89***************888999****************************************.999** PP NAM 101 glkktLvfykgrapkgektdWvmheyrle 129 g+kktLvfykgrapkgekt+Wvmhe+rle Ahy012805 115 GMKKTLVFYKGRAPKGEKTNWVMHEFRLE 143 **************************985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.31E-65 | 13 | 167 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 59.675 | 17 | 167 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.5E-29 | 18 | 142 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence Send to blast |
MEKVASLVLK EEEQMDLPPG FRFHPTDEEL ITHYLYKKVI DTNFAARAIG EVDLNRCEPW 60 DLPWKAKMGE KEWYFFCVRD RKYPTGLRTN RATESGYWKA TGKDKEIFRG KSLVGMKKTL 120 VFYKGRAPKG EKTNWVMHEF RLEGKFSIHN LPKTAKNEWV ICRVFRKSSA GKKVHISGIM 180 RLDTFRTELD SSGLPPLTET SPSFDTIHDE SPYVPCFSNP IDVPRNQAAG GSGGGGGVFG 240 GSFPTTPPLX |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 2e-56 | 14 | 173 | 14 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 2e-56 | 14 | 173 | 14 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 2e-56 | 14 | 173 | 14 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 2e-56 | 14 | 173 | 14 | 171 | NO APICAL MERISTEM PROTEIN |
3swm_A | 2e-56 | 14 | 173 | 17 | 174 | NAC domain-containing protein 19 |
3swm_B | 2e-56 | 14 | 173 | 17 | 174 | NAC domain-containing protein 19 |
3swm_C | 2e-56 | 14 | 173 | 17 | 174 | NAC domain-containing protein 19 |
3swm_D | 2e-56 | 14 | 173 | 17 | 174 | NAC domain-containing protein 19 |
3swp_A | 2e-56 | 14 | 173 | 17 | 174 | NAC domain-containing protein 19 |
3swp_B | 2e-56 | 14 | 173 | 17 | 174 | NAC domain-containing protein 19 |
3swp_C | 2e-56 | 14 | 173 | 17 | 174 | NAC domain-containing protein 19 |
3swp_D | 2e-56 | 14 | 173 | 17 | 174 | NAC domain-containing protein 19 |
4dul_A | 2e-56 | 14 | 173 | 14 | 171 | NAC domain-containing protein 19 |
4dul_B | 2e-56 | 14 | 173 | 14 | 171 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the promoter regions of genes involved in chlorophyll catabolic processes, such as NYC1, SGR1, SGR2 and PAO. {ECO:0000269|PubMed:27021284}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Repressed by the microRNA miR164. {ECO:0000269|PubMed:15294871, ECO:0000269|PubMed:17098808}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016192125.1 | 0.0 | NAC domain-containing protein 100 | ||||
Swissprot | Q9FLJ2 | 1e-126 | NC100_ARATH; NAC domain-containing protein 100 | ||||
TrEMBL | V7CEG8 | 1e-142 | V7CEG8_PHAVU; Uncharacterized protein | ||||
STRING | XP_007155297.1 | 1e-142 | (Phaseolus vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61430.1 | 1e-128 | NAC domain containing protein 100 |
Publications ? help Back to Top | |||
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