PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ahy012673 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | C2H2 | ||||||||
Protein Properties | Length: 245aa MW: 28038.5 Da PI: 8.2841 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.9 | 0.00016 | 94 | 116 | 2 | 23 |
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +C+ C+++++++ +L H++ H Ahy012673 94 SCSVCSRVYPTSRLLSIHLSEvH 116 6******************9888 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00355 | 0.76 | 66 | 91 | IPR015880 | Zinc finger, C2H2-like |
PROSITE pattern | PS00028 | 0 | 68 | 91 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 1.8 | 93 | 116 | IPR015880 | Zinc finger, C2H2-like |
PROSITE pattern | PS00028 | 0 | 95 | 116 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 0.023 | 131 | 156 | IPR015880 | Zinc finger, C2H2-like |
PROSITE pattern | PS00028 | 0 | 133 | 156 | IPR007087 | Zinc finger, C2H2 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence Send to blast |
MAMEVDPNLE LTSFSFWKPL RRRFNPDSPF FASGNLQREL LAKQVALELT EENEQLEDCI 60 QDGREVFCPI VGCGTRLTSI EDFENHYNAR HTASCSVCSR VYPTSRLLSI HLSEVHDSFF 120 QAKLARGYDV YECLVEGCGL KFKTYSSRQQ HLVDKHKFPT SFDFFKKSRP SKKQRLKSQR 180 KQSVQKEDAS ETMEVENAAI DDLTSAVSRM STSDSTPSSI SFGRRNKGLT FAPRVVQQKT 240 QQRDN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 165 | 176 | KKSRPSKKQRLK |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020960545.1 | 0.0 | zinc finger protein 511 | ||||
Refseq | XP_020960546.1 | 0.0 | zinc finger protein 511 | ||||
Refseq | XP_029149818.1 | 0.0 | zinc finger protein 511 | ||||
Refseq | XP_029149819.1 | 0.0 | zinc finger protein 511 | ||||
TrEMBL | A0A444YSN5 | 0.0 | A0A444YSN5_ARAHY; Uncharacterized protein | ||||
TrEMBL | A0A444YSQ3 | 0.0 | A0A444YSQ3_ARAHY; Uncharacterized protein | ||||
STRING | XP_007161722.1 | 1e-140 | (Phaseolus vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G14140.1 | 4e-90 | zinc ion binding;nucleic acid binding;zinc ion binding |