PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy012554

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

MYB

Protein Properties

Length: 292aa MW: 32187.8 Da PI: 6.5929

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S59521816	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	21.4	5.7e-07	2	39	12	48
HHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 12 lvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 l +++k Gg+ +W++ ++ g+ R++k+c++rw +yl Ahy012554 2 LSNYIKNNGGHgSWRSLPKITGLLRCGKSCRLRWTNYL 39 567888888889********99**********97 PP
2	Myb_DNA-binding	49	1.4e-15	45	90	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T eE++l ++++ lG++ W++Ia+ ++ gRt++++k+ w+++l Ahy012554 45 RGPFTSEEEKLVIQLHGILGNR-WAAIASQLP-GRTDNEIKNLWNTHL 90 89******************.*****.**********986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	7.668	1	39	IPR017930	Myb domain
SMART	SM00717	83	1	41	IPR001005	SANT/Myb domain
Gene3D	G3DSA:1.10.10.60	6.0E-14	2	46	IPR009057	Homeodomain-like
SuperFamily	SSF46689	2.82E-22	26	99	IPR009057	Homeodomain-like
PROSITE profile	PS51294	24.69	40	94	IPR017930	Myb domain
SMART	SM00717	2.9E-14	44	92	IPR001005	SANT/Myb domain
Pfam	PF00249	2.8E-14	45	90	IPR001005	SANT/Myb domain
Gene3D	G3DSA:1.10.10.60	1.1E-25	47	95	IPR009057	Homeodomain-like
CDD	cd00167	1.21E-10	47	90	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 292 aa Download sequence Send to blast
ILSNYIKNNG GHGSWRSLPK ITGLLRCGKS CRLRWTNYLR PDIKRGPFTS EEEKLVIQLH 60 GILGNRWAAI ASQLPGRTDN EIKNLWNTHL KKRLKNMGID PKTHEPVASP HYPLDKAHSS 120 SISTRHMAQW ESARLEAEAR LSTESSKFNK NNPSSLGEGK STNESDYFLR IWNSEVGEAF 180 RSVGKSENKG GCCQSDSPIS AGSCSNKCES IYNVTAELAL NQLGTSNNGI GGNHVKEELV 240 LCAEEEGMVV HGSDSSCSNE LEDSSDTALQ LLLDFPINND MSFLEGNSFD CN

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1a5j_A	1e-20	26	94	40	108	B-MYB
Search in ModeBase

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor that may play a role in flower development by repressing ANT (PubMed:19232308). Regulates the transition of meristem identity from vegetative growth to flowering. Acts downstream of LFY and upstream of AP1. Directly activates AP1 to promote floral fate. Together with LFY and AP1 may constitute a regulatory network that contributes to an abrupt and robust meristem identity transition (PubMed:21750030). {ECO:0000269\|PubMed:19232308, ECO:0000269\|PubMed:21750030}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025649318.1	0.0	transcription factor MYB41
Swissprot	Q9M2D9	1e-105	MYB17_ARATH; Transcription factor MYB17
TrEMBL	A0A444ZM40	0.0	A0A444ZM40_ARAHY; Uncharacterized protein
STRING	XP_007139892.1	1e-136	(Phaseolus vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61250.1	1e-107	myb domain protein 17