PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ahy011698 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | NAC | ||||||||
Protein Properties | Length: 280aa MW: 32181.1 Da PI: 8.2965 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 167.5 | 4.6e-52 | 1 | 124 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvgl 102 pGfrFhPtdeel+v+ L++++++k++++ +vi+evdiyk++Pw+Lp k++ +e+ewyfFs+rd+ky++g r+nrat sgyWkatg+dk+++s ++++vg+ Ahy011698 1 PGFRFHPTDEELIVHSLCNQATSKPCPA-SVIPEVDIYKFDPWELPDKTSFGENEWYFFSPRDRKYPNGVRPNRATVSGYWKATGTDKAIYS-GSKHVGV 98 8***************************.99***************888899****************************************.999**** PP NAM 103 kktLvfykgrapkgektdWvmheyrl 128 kk Lvfykgr pkg ktdW+mheyrl Ahy011698 99 KKALVFYKGRPPKGIKTDWIMHEYRL 124 ************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 58.612 | 1 | 151 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 2.88E-62 | 1 | 151 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.9E-24 | 1 | 124 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 280 aa Download sequence Send to blast |
PGFRFHPTDE ELIVHSLCNQ ATSKPCPASV IPEVDIYKFD PWELPDKTSF GENEWYFFSP 60 RDRKYPNGVR PNRATVSGYW KATGTDKAIY SGSKHVGVKK ALVFYKGRPP KGIKTDWIMH 120 EYRLVGSRRQ PTKQIGSMRL DDWVLCRIYK KRSIAKSMLE PKEEFPTMPQ INHHLTSSSN 180 DGNDNNDDEQ EMMMKFPRTC SLTHLLEMDY LGPISQILSD GSYNSTFDFQ LNSANVGNMI 240 MDPFVKQPQI LEIPNKNNHN NPYYDVDSGK NNLVKQNSTX |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 8e-72 | 1 | 156 | 19 | 170 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 8e-72 | 1 | 156 | 19 | 170 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 8e-72 | 1 | 156 | 19 | 170 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 8e-72 | 1 | 156 | 19 | 170 | NO APICAL MERISTEM PROTEIN |
3swm_A | 1e-71 | 1 | 156 | 22 | 173 | NAC domain-containing protein 19 |
3swm_B | 1e-71 | 1 | 156 | 22 | 173 | NAC domain-containing protein 19 |
3swm_C | 1e-71 | 1 | 156 | 22 | 173 | NAC domain-containing protein 19 |
3swm_D | 1e-71 | 1 | 156 | 22 | 173 | NAC domain-containing protein 19 |
3swp_A | 1e-71 | 1 | 156 | 22 | 173 | NAC domain-containing protein 19 |
3swp_B | 1e-71 | 1 | 156 | 22 | 173 | NAC domain-containing protein 19 |
3swp_C | 1e-71 | 1 | 156 | 22 | 173 | NAC domain-containing protein 19 |
3swp_D | 1e-71 | 1 | 156 | 22 | 173 | NAC domain-containing protein 19 |
4dul_A | 8e-72 | 1 | 156 | 19 | 170 | NAC domain-containing protein 19 |
4dul_B | 8e-72 | 1 | 156 | 19 | 170 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor that binds DNA motifs 5'-CGT[AG](5N)NACG[ACT][AC][AT][ACG][ACT]-3' and 5'-CACG[ACT][AC][AT][AGT][CT]-3' in target genes promoters. Promotes leaf senescence (developmental, light-induced and ABA-induced senescence) and regulates fruit yield and sugar content, probably by establishing abscisic acid (ABA) homeostasis. Activates the expression of senescence and ABA associated genes including NCED1, ABCG40, CYP707A2, SAG113, SGR1 and PAO, by directly binding to their promoters. {ECO:0000269|PubMed:29760199}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Accumulates during age-dependent and dark-induced leaf senescence. Induced by abscisic acid (ABA). {ECO:0000269|PubMed:29760199}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016202769.1 | 0.0 | NAC transcription factor 29 isoform X1 | ||||
Refseq | XP_025654738.1 | 0.0 | NAC transcription factor 29 isoform X1 | ||||
Swissprot | K4BNG7 | 1e-113 | NAP2_SOLLC; NAC domain-containing protein 2 | ||||
TrEMBL | A0A444Z502 | 0.0 | A0A444Z502_ARAHY; Uncharacterized protein | ||||
STRING | GLYMA02G12220.1 | 1e-146 | (Glycine max) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69490.1 | 1e-112 | NAC-like, activated by AP3/PI |
Publications ? help Back to Top | |||
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