PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ahy011465 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | ERF | ||||||||
Protein Properties | Length: 208aa MW: 22798.2 Da PI: 11.0105 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 66.1 | 7.1e-21 | 124 | 173 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++GVr+++ +grW AeIrdp ++rkr++lg+f+taeeAa+ ++aa+ k++g Ahy011465 124 RFRGVRQRP-WGRWTAEIRDP---NRRKRVWLGTFDTAEEAAAVYDAAAVKFKG 173 59*******.**********8...335**********************99987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PIRSF | PIRSF038123 | 1.5E-42 | 7 | 207 | IPR017392 | AP2/ERF transcription factor ERF/PTI6 |
Pfam | PF00847 | 1.2E-13 | 124 | 173 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 5.75E-18 | 124 | 181 | No hit | No description |
Gene3D | G3DSA:3.30.730.10 | 1.7E-29 | 124 | 181 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 24.197 | 124 | 181 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.18E-21 | 124 | 181 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 3.0E-34 | 124 | 187 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 9.1E-11 | 125 | 136 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 9.1E-11 | 147 | 163 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 208 aa Download sequence Send to blast |
MSAHSTLKLQ NLAIRSSSFD FEGDPPCKTA KRLRSKKLLR IILTDPDATD SESSNDEAEE 60 QTPSPRVKRE IITHIMTPRL HSSHSSSPTA SSSPSSPSIG SGQNHVDRNR FKRKIKRTIS 120 GSGRFRGVRQ RPWGRWTAEI RDPNRRKRVW LGTFDTAEEA AAVYDAAAVK FKGPGAAINF 180 PRGDSEVSGE SFAVVSGEGF VAVSGSRX |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 6e-19 | 123 | 181 | 13 | 72 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Component of the cytokinin signaling pathway involved in cotyledons, leaves, and embryos development. Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:16832061}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025692156.1 | 1e-147 | pathogenesis-related genes transcriptional activator PTI6 | ||||
Swissprot | Q9SUE3 | 4e-32 | CRF4_ARATH; Ethylene-responsive transcription factor CRF4 | ||||
TrEMBL | A0A445EVK6 | 1e-146 | A0A445EVK6_ARAHY; Uncharacterized protein | ||||
STRING | XP_004500382.1 | 1e-50 | (Cicer arietinum) | ||||
STRING | XP_004500384.1 | 1e-50 | (Cicer arietinum) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G11140.1 | 7e-20 | cytokinin response factor 1 |
Publications ? help Back to Top | |||
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