PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ahy010905 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | ERF | ||||||||
Protein Properties | Length: 191aa MW: 21524.8 Da PI: 11.25 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 66.5 | 5.2e-21 | 135 | 184 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++GVr+++ +grW+AeIrdp++ rkr++lg+f+taeeAa +++a+ kl+g Ahy010905 135 RFRGVRQRP-WGRWAAEIRDPTQ---RKRVWLGTFDTAEEAATEYDRAAVKLKG 184 69*******.**********965...5************************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PIRSF | PIRSF038123 | 4.1E-56 | 9 | 191 | IPR017392 | AP2/ERF transcription factor ERF/PTI6 |
SMART | SM00380 | 2.5E-29 | 135 | 191 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 8.0E-14 | 135 | 184 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.5E-20 | 135 | 190 | IPR016177 | DNA-binding domain |
CDD | cd00018 | 6.70E-29 | 135 | 190 | No hit | No description |
PROSITE profile | PS51032 | 22.998 | 135 | 191 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 4.6E-28 | 135 | 190 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.3E-10 | 136 | 147 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.3E-10 | 158 | 174 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 191 aa Download sequence Send to blast |
MSVQSTLKLE KLNLKLSPSS SNFEGDPPSK TRRKTKQRLV RIILTDHDAT DSDSSSDEAQ 60 RNNTHKLKRE ITQITMHLPS PYSSTTTSPS PSSSSSSTSS SIFGSVSSDS LQRRTKSCKR 120 PKKPQLQPPE RHRNRFRGVR QRPWGRWAAE IRDPTQRKRV WLGTFDTAEE AATEYDRAAV 180 KLKGPNAVTN X |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2gcc_A | 2e-19 | 136 | 190 | 6 | 61 | ATERF1 |
3gcc_A | 2e-19 | 136 | 190 | 6 | 61 | ATERF1 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016166981.1 | 1e-135 | pathogenesis-related genes transcriptional activator PTI6 | ||||
Refseq | XP_025666520.1 | 1e-135 | pathogenesis-related genes transcriptional activator PTI6 | ||||
TrEMBL | A0A444YC15 | 1e-134 | A0A444YC15_ARAHY; Uncharacterized protein | ||||
STRING | XP_007142025.1 | 2e-56 | (Phaseolus vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27950.1 | 1e-27 | cytokinin response factor 4 |