PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy010748
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB
Protein Properties Length: 116aa    MW: 13444.8 Da    PI: 10.8555
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59522803PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.21.4e-161461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd++l++ +   G  +W+++++  g++R++k+c++rw +yl
        Ahy010748 14 KGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNYL 61
                     79********************************************97 PP
2Myb_DNA-binding55.51.3e-1769111347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                        T+ E++l +d++++lG++ W++Ia++++ gRt++++k++w+++
        Ahy010748  69 LLTQAEEQLVIDLHARLGNR-WSKIAARLP-GRTDNEIKNHWNTH 111
                      5699****************.*********.************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.604.0E-22563IPR009057Homeodomain-like
PROSITE profilePS5129414.027961IPR017930Myb domain
SuperFamilySSF466893.18E-2811108IPR009057Homeodomain-like
SMARTSM007178.5E-131363IPR001005SANT/Myb domain
PfamPF002491.7E-151461IPR001005SANT/Myb domain
CDDcd001679.37E-91661No hitNo description
PROSITE profilePS5129427.77462116IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.0E-2564116IPR009057Homeodomain-like
SMARTSM007174.3E-1566114IPR001005SANT/Myb domain
PfamPF002491.0E-1569111IPR001005SANT/Myb domain
CDDcd001675.90E-1171112No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 116 aa     Download sequence    Send to blast
MGRQPCCDKL GVKKGPWTAE EDKKLINFIL TNGQCCWRAV PKLAGLRRCG KSCRLRWTNY  60
LRPDLKRGLL TQAEEQLVID LHARLGNRWS KIAARLPGRT DNEIKNHWNT HIKKKL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A1e-29141167108B-MYB
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtR2R3 MYB-type transcription factor controlling the production of volatile benzoides in flowers by regulating the shikimate pathway, namely by activation of the 5-enol-pyruvylshikimate-3-phosphate synthase gene. This scent, mostly produced in the evening and night by the petals, attracts the pollinators. Anthocyanins production is not controlled by ODO1 as color and scent are produced at different stages of development. {ECO:0000269|PubMed:15805488}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Increases before the onset of volatile emission at the end of the light period, peaks at night and decreases when volatile emission declines early morning.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014520093.15e-81transcription repressor MYB6
RefseqXP_015964396.16e-81protein ODORANT1
RefseqXP_021768403.17e-81protein ODORANT1-like
RefseqXP_025703049.16e-81protein ODORANT1
SwissprotQ50EX61e-78ODO1_PETHY; Protein ODORANT1
TrEMBLA0A1S3VNX61e-79A0A1S3VNX6_VIGRR; transcription repressor MYB6
TrEMBLA0A445AT642e-79A0A445AT64_ARAHY; Uncharacterized protein
TrEMBLA0A445ER211e-79A0A445ER21_ARAHY; Uncharacterized protein
STRINGGLYMA11G03300.15e-80(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G12350.18e-80myb domain protein 42
Publications ? help Back to Top
  1. Verdonk JC,Haring MA,van Tunen AJ,Schuurink RC
    ODORANT1 regulates fragrance biosynthesis in petunia flowers.
    Plant Cell, 2005. 17(5): p. 1612-24
    [PMID:15805488]