PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy009460
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family C2H2
Protein Properties Length: 195aa    MW: 21645.2 Da    PI: 8.0982
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59547617PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.30.0002598116321
                ETTTTEEESSHHHHHHHHH CS
    zf-C2H2   3 CpdCgksFsrksnLkrHir 21 
                C+dCgk F ++  L  H++
  Ahy009460  98 CKDCGKGFQSWRALFGHMK 116
                ******************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF139129.4E-6426IPR007087Zinc finger, C2H2
SMARTSM003550.26426IPR015880Zinc finger, C2H2-like
SuperFamilySSF576673.02E-6426No hitNo description
PROSITE profilePS501579.12426IPR007087Zinc finger, C2H2
PROSITE patternPS000280626IPR007087Zinc finger, C2H2
SuperFamilySSF576673.02E-691118No hitNo description
PROSITE profilePS5015711.53196123IPR007087Zinc finger, C2H2
SMARTSM003550.008696118IPR015880Zinc finger, C2H2-like
Gene3DG3DSA:3.30.160.602.4E-498129IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PfamPF139121.9E-598120IPR007087Zinc finger, C2H2
PROSITE patternPS00028098118IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    Send to blast
XNKHVCKFCS RSFPCGRSLG GHMRSHVING DIDHHHHDNN KLLASSSSTA KIKKMLSSSS  60
STENNTGIGS EGYGLRENPK KTWRLTNSTS EDNSLLFCKD CGKGFQSWRA LFGHMKCHSS  120
EKVESMECDQ DSSWTNNSAS HSDNEEANAP SRRRRSKRTR TRYIAPLSAP AATTTDSSVS  180
EADEHEQEEV AMSLX
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016182454.11e-138zinc finger protein ZAT4-like
RefseqXP_025684265.11e-138zinc finger protein ZAT4
TrEMBLA0A444WWN31e-137A0A444WWN3_ARAHY; Uncharacterized protein
STRINGXP_009339147.15e-47(Pyrus x bretschneideri)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26610.12e-20C2H2-like zinc finger protein