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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | Ahy007586 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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| Family | TCP | ||||||||
| Protein Properties | Length: 200aa MW: 21083.6 Da PI: 8.3519 | ||||||||
| Description | TCP family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | TCP | 101.4 | 1.6e-31 | 47 | 128 | 4 | 86 |
TCP 4 kkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnss 86
++++++hTkv+gR+RRvR++ +caar+F+L++eLG+ +d++tieWL+ a p+i+++tgt++ +a +++++ +++s++s
Ahy007586 47 SSRSNKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRSDGETIEWLFS-ADPSIIAATGTGTVPAAPVSSSAAAVTSSAPS 128
67899******************************************996.9**********888885552222222222222 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| Pfam | PF03634 | 2.4E-27 | 50 | 139 | IPR005333 | Transcription factor, TCP |
| PROSITE profile | PS51369 | 22.209 | 51 | 105 | IPR017887 | Transcription factor TCP subgroup |
| Sequence ? help Back to Top |
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| Protein Sequence Length: 200 aa Download sequence Send to blast |
MSSEIVLHQQ FSQSEPLPIS STVTTTTTTT GVALRKSSGA GALSTTSSRS NKDRHTKVNG 60 RGRRVRMPPL CAARIFQLTR ELGHRSDGET IEWLFSADPS IIAATGTGTV PAAPVSSSAA 120 AVTSSAPSVS CRVQPSASAT PTMVCAGGSQ WPSRRLDLCQ PPPGMEYASV NGHRYMPFTS 180 LLLQPATADE SQHEEALSDQ |
| Annotation -- Protein ? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | ||||
| Refseq | XP_025635107.1 | 1e-118 | transcription factor TCP11-like | ||||
| Refseq | XP_025663894.1 | 1e-118 | transcription factor TCP11-like | ||||
| Swissprot | Q9SJK7 | 2e-36 | TCP11_ARATH; Transcription factor TCP11 | ||||
| TrEMBL | A0A394DAP5 | 2e-71 | A0A394DAP5_LUPAN; Uncharacterized protein | ||||
| STRING | GLYMA13G20710.2 | 2e-65 | (Glycine max) | ||||
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT2G37000.1 | 9e-30 | TCP family protein | ||||
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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