PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ahy004468 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | C2H2 | ||||||||
Protein Properties | Length: 241aa MW: 25791.8 Da PI: 9.3033 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.3 | 0.00053 | 104 | 122 | 1 | 19 |
EEETTTTEEESSHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrH 19 ykC+ C+k Fs+ L H Ahy004468 104 YKCSVCNKAFSSYQALGGH 122 9**********98887666 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.160.60 | 5.2E-4 | 104 | 123 | IPR013087 | Zinc finger C2H2-type/integrase DNA-binding domain |
PROSITE profile | PS50157 | 9.265 | 104 | 138 | IPR007087 | Zinc finger, C2H2 |
Pfam | PF13912 | 2.8E-9 | 104 | 122 | IPR007087 | Zinc finger, C2H2 |
Pfam | PF13912 | 0.0027 | 162 | 173 | IPR007087 | Zinc finger, C2H2 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003676 | Molecular Function | nucleic acid binding | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence Send to blast |
MALEALKSPT AAGPSFSFEE TNNLSYLEAP WAKRKRSKRA NRMELPQNCS EEEYLALCLI 60 MLAPAPPPSP QSKPPATAIP SKPHSSPAPS VDESAPISTA NLIYKCSVCN KAFSSYQALG 120 GHQGQPPQVR CCHRWRRKPS LQPPLPSPPV PFPKHPTAEA KAHECSICHK SFPNGTGFGR 180 TQAVXHYDGG AAAFASAAAG SAVTASEGGW VYSPLLAHSR TSNLNLPAFP DLSKQVSSWK 240 X |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016163925.1 | 3e-82 | zinc finger protein ZAT10 | ||||
Refseq | XP_025666630.1 | 3e-82 | zinc finger protein ZAT10 | ||||
TrEMBL | A0A445C8D1 | 8e-81 | A0A445C8D1_ARAHY; Uncharacterized protein | ||||
STRING | XP_007136747.1 | 9e-52 | (Phaseolus vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19580.2 | 1e-25 | zinc-finger protein 2 |