PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy004006
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family B3
Protein Properties Length: 273aa    MW: 31770.6 Da    PI: 10.2533
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-171a-Arachis_hypogaea-22596PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B337.44.4e-1222112298
                EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
         B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                fk+ + + +l+ + + lp kf+e+hg+    s  l l+ ++g + +v    ++++g+++++kGWkeFv    L+ g  + F ++   + ++ v++f+
  Ahy004006  22 FKIIL-KQALQDDDFKLPIKFTEKHGSG--LSNPLYLKPPDGTERRVDW--TNQDGEILFKKGWKEFVAYYSLDHGHLLWFDYNI-GTSHMEVHIFD 112
                55554.44556667***********755..6667***************..*******************************963.45556888886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.104.9E-1714113IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019364.51E-1615113IPR015300DNA-binding pseudobarrel domain
CDDcd100176.58E-1020112No hitNo description
PROSITE profilePS508639.33320114IPR003340B3 DNA binding domain
SMARTSM010196.7E-521114IPR003340B3 DNA binding domain
PfamPF023623.6E-923112IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    Send to blast
MASSSSQQNK QSPSTSTVIS FFKIILKQAL QDDDFKLPIK FTEKHGSGLS NPLYLKPPDG  60
TERRVDWTNQ DGEILFKKGW KEFVAYYSLD HGHLLWFDYN IGTSHMEVHI FDMGCLQIEY  120
PDNDQIKEQL PRRDQQSVKR PEEQKTRHVD SSPSTQNMRL NEGPQKKRLN ELPREVRGQP  180
TKKLRALVSS ASKSRQLEND TQIRDVERSL NSHGIKSKEK NREMLVSVNQ DYNGKRNRRR  240
KDSESSIRPC PARPESLKEA KKFKWEKPSX IIK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020969302.10.0B3 domain-containing protein LOC_Os12g40080-like isoform X2
TrEMBLA0A444XAN90.0A0A444XAN9_ARAHY; Uncharacterized protein
TrEMBLA0A444XAP50.0A0A444XAP5_ARAHY; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49475.16e-17B3 family protein